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Published on: March 17, 2023
SNP mutations occurring in thyroid hormone receptor influenced individual susceptibility to triiodothyronine:
Yaquan Liu1, Kaili Qu1, Ying Hai1
1School of Pharmacy, Lanzhou University, Lanzhou, China.
Abstract:
The increasing evidences have suggested that expression of single nucleotide polymorphisms (SNP) coded thyroid hormone receptors (THR) generally are associated with individual susceptibility to chemicals. In the present research, multiple molecular dynamics simulations on four SNP mutants (G332R, T337Δ, G345R, and G347E) were performed to investigate the structural and dynamical altering, which could lead to a binding capability variation to triiodothyronine (T3). It proved the structures of two SNP mutants (G345R and T337Δ) occurring in the THR proteins had experienced conformational change to a great extend, which also led to a significant decreasing in binding ability with T3. In addition, two mutates (G345R and G347E) and wild type THR proteins were expressed and purified based on site-directed mutagenesis technology to test their binding abilities with T3 by fluorescence experiments. The fluorescence quenching efficiencies of two mutates displayed that the conjugation with T3 decreased with a significant rate in G345R system and a little rate in G347E system compared with its wild type. It was consistent with the molecular dynamic research that the SNP mutations did change structures of THR protein, and thereby decreased the binding behavior of T3 at different extent. The overall molecular-level look at the protein structure may provide the structural basis to explain how one amino acid change can create a ripple effect on the protein structures and eventually affect the binding affinity of the ligands, which maybe the first stage to understand how SNP mutation results in individual difference in susceptibility to variant chemicals.
Insights
Single nucleotide polymorphisms (SNPs) in thyroid hormone receptors (THRs) alter protein structure, reducing binding to triiodothyronine (T3). This impacts chemical susceptibility, offering insights into individual differences.
Area of Science:
- Biochemistry
- Molecular Biology
- Pharmacogenomics
Background:
- Single nucleotide polymorphisms (SNPs) in thyroid hormone receptors (THRs) are linked to varying susceptibility to chemical exposure.
- Understanding how these genetic variations affect THR function is crucial for personalized medicine.
Purpose of the Study:
- To investigate the structural and dynamic changes in THR caused by specific SNP mutations (G332R, T337Δ, G345R, G347E).
- To determine the impact of these mutations on the binding affinity of THR to triiodothyronine (T3).
Main Methods:
- Multiple molecular dynamics simulations were conducted on four THR SNP mutants.
- Site-directed mutagenesis was used to express and purify wild-type and mutant THR proteins (G345R, G347E).
- Fluorescence quenching experiments were performed to assess T3 binding affinity.
Main Results:
- Molecular dynamics simulations revealed significant conformational changes in G345R and T337Δ mutants, decreasing T3 binding.
- Fluorescence experiments confirmed reduced T3 binding affinity in G345R and G347E mutants compared to wild-type THR.
- The study demonstrated that SNP mutations alter THR structure, affecting T3 binding affinity to varying degrees.
Conclusions:
- SNP mutations in THR proteins induce structural alterations that diminish T3 binding.
- These findings provide a molecular basis for understanding how genetic variations influence chemical susceptibility.
- The research highlights the importance of THR structure-function relationships in explaining individual differences in response to chemicals.
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