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Updated: Feb 21, 2026

Measuring Nucleotide Binding to Intact, Functional Membrane Proteins in Real Time
Published on: March 11, 2021
Structural insights into the competitive inhibition of the ATP-gated P2X receptor channel
Go Kasuya1, Toshiaki Yamaura2, Xiao-Bo Ma3
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, 2-11-16 Yayoi, Bunkyo-ku, Tokyo, 113-0032, Japan.
Abstract:
P2X receptors are non-selective cation channels gated by extracellular ATP, and the P2X7 receptor subtype plays a crucial role in the immune and nervous systems. Altered expression and dysfunctions of P2X7 receptors caused by genetic deletions, mutations, and polymorphic variations have been linked to various diseases, such as rheumatoid arthritis and hypertension. Despite the availability of crystal structures of P2X receptors, the mechanism of competitive antagonist action for P2X receptors remains controversial. Here, we determine the crystal structure of the chicken P2X7 receptor in complex with the competitive P2X antagonist, TNP-ATP. The structure reveals an expanded, incompletely activated conformation of the channel, and identified the unique recognition manner of TNP-ATP, which is distinct from that observed in the previously determined human P2X3 receptor structure. A structure-based computational analysis furnishes mechanistic insights into the TNP-ATP-dependent inhibition. Our work provides structural insights into the functional mechanism of the P2X competitive antagonist.P2X receptors are nonselective cation channels that are gated by extracellular ATP. Here the authors present the crystal structure of chicken P2X7 with its bound competitive antagonist TNP-ATP and give mechanistic insights into TNP-ATP dependent inhibition through further computational analysis and electrophysiology measurements.
Insights
Structural insights into P2X7 receptor function were revealed by determining the crystal structure of the chicken P2X7 receptor bound to the competitive antagonist TNP-ATP. This study clarifies the unique binding of TNP-ATP, offering a mechanism for P2X receptor inhibition.
Area of Science:
- Structural Biology
- Molecular Pharmacology
- Immunology
Background:
- P2X receptors are ATP-gated cation channels vital for immune and nervous system functions.
- Dysfunction and altered expression of P2X7 receptors are implicated in diseases like rheumatoid arthritis and hypertension.
- The precise mechanism of competitive antagonist action on P2X receptors remains incompletely understood.
Purpose of the Study:
- To elucidate the structural basis of competitive antagonism at the P2X7 receptor.
- To investigate the interaction between the chicken P2X7 receptor and the antagonist TNP-ATP.
- To provide mechanistic insights into TNP-ATP-mediated inhibition.
Main Methods:
- X-ray crystallography of the chicken P2X7 receptor in complex with TNP-ATP.
- Structure-based computational analysis.
- Electrophysiology measurements.
Main Results:
- The crystal structure revealed an expanded, incompletely activated conformation of the P2X7 channel.
- A unique binding mode of TNP-ATP to the chicken P2X7 receptor was identified, differing from human P2X3.
- Computational analysis provided mechanistic details of TNP-ATP dependent inhibition.
Conclusions:
- The study provides critical structural insights into the mechanism of P2X competitive antagonists.
- The findings clarify the interaction of TNP-ATP with the P2X7 receptor, distinct from other subtypes.
- This work advances the understanding of P2X receptor pharmacology and potential therapeutic targeting.
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