Related Experiment Video
Updated: Feb 21, 2026

Phage Phenomics: Physiological Approaches to Characterize Novel Viral Proteins
Published on: June 11, 2015
Characterization and genomic study of "phiKMV-Like" phage PAXYB1 infecting Pseudomonas aeruginosa
1Key Laboratory of Pathogen Biology of Jiangsu Province, Department of Microbiology, Nanjing Medical University, Nanjing, 211166, China.
Abstract:
Bacteriophage PAXYB1 was recently isolated from wastewater samples. This phage was chosen based on its lytic properties against clinical isolates of Pseudomonas aeruginosa (P. aeruginosa). In the present study, characterized PAXYB1, clarified its morphological and lytic properties, and analyzed its complete genome sequence. Based on the morphology of PAXYB1, it is a Podoviridae. The linear GC-rich (62.29%) double-stranded DNA genome of PAXYB1 is 43,337 bp including direct terminal repeats (DTRs) of 468 bp. It contains 60 open reading frames (ORFs) that are all encoded within the same strand. We also showed that PAXYB1 is a virulent phage and a new member of the phiKMV-like phages genus. Twenty-eight out of sixty predicted gene products (gps) showed significant homology to proteins of known function, which were confirmed by analyzing the structural proteome. Altogether, our work identified a novel lytic bacteriophage that lyses P. aeruginosa PAO1 and efficiently infects and kills several clinical isolates of P. aeruginosa. This phage has potential for development as a biological disinfectant to control P. aeruginosa infections.
Insights
A novel bacteriophage, PAXYB1, effectively lyses Pseudomonas aeruginosa, including clinical strains. This virulent phage shows potential for developing biological disinfectants against P. aeruginosa infections.
Area of Science:
- Microbiology
- Virology
- Genomics
Background:
- Pseudomonas aeruginosa (P. aeruginosa) is an opportunistic pathogen causing significant infections.
- Bacteriophages are viruses that infect bacteria and are being explored as therapeutic agents.
- Wastewater is a rich source for isolating novel bacteriophages with lytic activity.
Purpose of the Study:
- To characterize the novel bacteriophage PAXYB1 isolated from wastewater.
- To determine its lytic activity against clinical isolates of P. aeruginosa.
- To analyze the complete genome sequence of PAXYB1.
Main Methods:
- Morphological characterization using electron microscopy.
- Lytic activity assays against P. aeruginosa strains.
- Whole-genome sequencing and bioinformatic analysis.
Main Results:
- PAXYB1 is a Podoviridae bacteriophage with a linear, double-stranded DNA genome of 43,337 bp.
- The phage exhibits virulent properties and belongs to the phiKMV-like phages genus.
- PAXYB1 efficiently lysed P. aeruginosa PAO1 and several clinical isolates.
Conclusions:
- PAXYB1 is a newly identified lytic bacteriophage targeting P. aeruginosa.
- Its genomic and lytic properties are elucidated.
- PAXYB1 holds promise for use as a biological disinfectant to combat P. aeruginosa infections.
More Related Videos
09:23Understanding the Impact of Temperate Bacteriophages on Their Lysogens Through Transcriptomics
Published on: January 5, 2024
07:46Use of Artificial Sputum Medium to Test Antibiotic Efficacy Against Pseudomonas aeruginosa in Conditions More Relevant to the Cystic Fibrosis Lung
Published on: June 5, 2012
Related Concept Videos
DNA Bacteriophages
Gene Regulation in Microbial Communities: Quorum Sensing
Lytic Cycle of Bacteriophages
Bacterial Phylum Tenericutes