Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

LiverWiki: a wiki-based database for human liver.

Tao Chen1, Mansheng Li1, Qiang He2

  • 1Beijing Institute of Life Omics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Radiation Medicine, 33 Life Science Park Rd, Changping District, Beijing, 102206, China.

BMC Bioinformatics
|October 15, 2017
PubMed
Summary

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Physiological and Transcriptomic Analysis of Bread Wheat MicroRNAs in Response to Zinc Availability.

Biomolecules·2026
Same author

Wheat SWI3B Subunit of SWI/SNF Chromatin Remodeling Complex Governs Powdery Mildew Susceptibility by Suppressing Salicylic Acid Biosynthesis.

Journal of fungi (Basel, Switzerland)·2026
Same author

Integrated network toxicology, machine learning, and bioinformatics analysis reveals sodium dehydroacetate-induced coagulation dysfunction in colorectal cancer.

Drug and chemical toxicology·2026
Same author

TaGASR25 interacts with TaC3HC4 to modulate seed dormancy and germination in common wheat.

The Plant journal : for cell and molecular biology·2026
Same author

Chromatin Remodeler TaSWI3D Controls Wheat Susceptibility to Pathogenic Fungus <i>Blumeria graminis forma specialis tritici</i>.

Microorganisms·2025
Same author

Comparison of methodological uncertainties in tissue parameter estimation for carbon ion dose calculation.

Medical physics·2025

LiverWiki is a new wiki-based database integrating diverse liver data, including genes, proteins, and diseases. This resource enables the scientific community to easily share and update liver-related biological information.

Area of Science:

  • Biomedical Informatics
  • Genomics
  • Proteomics
  • Metabolomics

Background:

  • Omics technologies generate vast amounts of liver-related data.
  • Existing liver data resources are fragmented and struggle to keep pace with data growth.
  • Integrating diverse liver data is challenging due to the need for sustained human effort.

Purpose of the Study:

  • To create a comprehensive, community-driven database for liver-related biological data.
  • To provide an accessible and searchable resource for researchers.
  • To facilitate the flexible and efficient sharing of new liver discoveries.

Main Methods:

  • Developed LiverWiki, a wiki-based database using MediaWiki.
  • Integrated liver-related genes, homolog genes, gene expressions (microarray and RNA-Seq), proteins, interactions, post-translational modifications, pathways, diseases, metabolites, and literature.
Keywords:
Community-driven sharingHuman liverWiki-based database

Related Experiment Videos

  • Implemented editable tables to support community contributions and data updates.

    • Main Results:

    • LiverWiki contains 141,897 content pages, including extensive data on genes, proteins, gene expression, metabolites, and diseases.
    • The database facilitates searching, browsing, reviewing, and refining liver-related information.
    • Community contributions allow for the integration of newly produced data with existing knowledge.

    Conclusions:

    • LiverWiki serves as a centralized, comprehensive resource for liver-related data.
    • The platform empowers the research community to share and update data flexibly and efficiently.
    • LiverWiki enables rapid dissemination of new discoveries through immediate integration, bypassing traditional curation bottlenecks.