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An Efficient Pipeline for Abdomen Segmentation in CT Images
Hasan Koyuncu1, Rahime Ceylan2, Mesut Sivri3
1Engineering Faculty, Department of Electrical and Electronics Engineering, Selcuk University, 42250, Konya, Turkey. hasankoyuncu@selcuk.edu.tr.
Journal of Digital Imaging
|October 26, 2017
Summary
This study introduces a new statistical pipeline for accurate abdomen segmentation in computed tomography (CT) scans, overcoming common image quality issues. The method achieves high performance, enabling better real-time medical diagnoses.
Area of Science:
- Medical Imaging
- Computer-Aided Diagnosis
- Biomedical Engineering
Background:
- Computed tomography (CT) scans often present image quality challenges like discontinuous edges and poor contrast, hindering accurate abdomen segmentation.
- Existing segmentation techniques struggle with these handicaps, impacting their utility in real-time diagnostic systems.
- Efficient abdomen segmentation is crucial for subsequent analyses such as feature selection and classification in medical imaging.
Purpose of the Study:
- To develop an efficient and robust statistical pipeline for abdomen segmentation in CT scans.
- To create a method that is unaffected by common image quality disadvantages inherent in CT imaging.
- To provide a reliable foundation for real-time diagnostic systems requiring precise abdominal region analysis.
Main Methods:
- A statistical pipeline integrating intensity-based, morphological, and histogram-based procedures was designed.
- The pipeline was optimized using 16 training CT images with inherent segmentation disadvantages.
- Performance was evaluated on 16 test and 26 validation CT images using six key performance metrics.
Main Results:
- The proposed method demonstrated high segmentation accuracy across training, testing, and validation datasets.
- Achieved average Jaccard index of 98.95/99.36/99.57%, Dice coefficient of 99.47/99.67/99.79%, and classification accuracy of 99.38/99.63/99.87%.
- The pipeline proved effective in overcoming common CT image handicaps, ensuring reliable abdomen segmentation.
Conclusions:
- A novel statistical pipeline effectively performs abdomen segmentation in CT scans, robust to common image quality issues.
- The developed method offers a significant advancement for applications requiring precise abdomen segmentation, including organ and tumor analysis.
- This study provides a detailed and reliable approach for abdomen segmentation, supporting the development of advanced real-time diagnostic tools.
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