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Updated: Feb 20, 2026

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Multiethnic Meta-Analysis Identifies RAI1 as a Possible Obstructive Sleep Apnea-related Quantitative Trait Locus in
Han Chen1,2,3, Brian E Cade4,5, Kevin J Gleason4,6
11 Department of Biostatistics, Harvard T. H. Chan School of Public Health, Boston, Massachusetts.
Obstructive sleep apnea (OSA) is a heritable condition with sex-specific differences. This study identified a novel genetic locus for non-rapid eye movement (NREM) sleep apnea-hypopnea index (AHI) in men, highlighting sex-specific genetic influences on OSA.
Area of Science:
- Genetics
- Sleep Medicine
- Genomics
Background:
- Obstructive sleep apnea (OSA) is a prevalent heritable sleep disorder with significant sexual dimorphism in prevalence and progression.
- Existing genetic studies for OSA have limitations, including focus on single ethnic groups and unexplained heritability.
- The apnea-hypopnea index (AHI) quantifies OSA severity, with potential differences in genetic associations between rapid eye movement (REM) and non-REM (NREM) sleep stages.
Purpose of the Study:
- To identify novel genetic association signals for OSA by analyzing NREM/REM-specific AHI.
- To conduct sex-specific analyses in multiethnic populations to account for the sexual dimorphism in OSA.
- To explore gene-by-sex interactions influencing AHI.
Main Methods:
- Genome-wide association tests were performed on up to 19,733 participants across African, Asian, European, and Hispanic/Latino American ancestries from 7 studies.
- Sex-specific analyses were conducted for NREM and REM AHI.
- Replication analysis was performed in an independent physiological research study.
Main Results:
- A significant quantitative trait locus (rs12936587) on chromosome 17 was identified for NREM AHI specifically in men (P = 1.7 × 10⁻⁸), and this finding was replicated.
- This locus is near the RAI1 gene and includes PEMT1, SREBF1, and RASD1, previously linked to cardiovascular disease, lipid metabolism, and specific genetic syndromes with sleep abnormalities.
- Suggestive gene-by-sex interactions were found, indicating that genetic variants for AHI may differ between sexes.
Conclusions:
- A novel genetic locus associated with NREM AHI in men was discovered, contributing to understanding the unexplained heritability of OSA.
- The findings support the hypothesis that sex-specific genetic factors influence OSA severity, aligning with observed clinical sexual dimorphism.
- Further research into this locus and gene-by-sex interactions is warranted to elucidate the genetic architecture of OSA.
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