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Updated: Feb 19, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
A cell based, high throughput assay for quantitative analysis of Hedgehog pathway activation using a Smoothened
Evgenii A Albert1, Christian Bökel2
1Center for Regenerative Therapies Dresden, Technical University Dresden, Fetscherstr. 105, 01307, Dresden, Germany.
Researchers developed a novel assay to track Hedgehog (Hh) pathway activation. This tool identified MAPK signalling and kinase inhibitors that modulate Smoothened (Smo) activity, offering new insights into Hh signalling.
Area of Science:
- Cell Biology
- Molecular Biology
- Developmental Biology
Background:
- The Hedgehog (Hh) signalling pathway is crucial for development and disease.
- Understanding Smoothened (Smo) regulation by Patched (Ptc) and Hh ligand is limited.
- Lack of tools for real-time subcellular monitoring of Smo activation hinders research.
Purpose of the Study:
- To develop a high-throughput cell culture assay for monitoring Drosophila Smo activation.
- To screen small molecule inhibitors for their effect on Smo activation.
- To investigate the cell biological basis of Hh pathway activation.
Main Methods:
- Developed a fluorescent sensor assay for Drosophila Smo activation.
- Screened a small molecule inhibitor library.
- Performed biochemical validation and single-cell level monitoring of Smo activation.
Main Results:
- Identified inhibitors targeting MAPK signalling, polo, and aurora kinases that increase Smo sensor fluorescence.
- Biochemical validation confirmed screen results and revealed distinct Smo activation modes for inhibitors like dobrafenib, tak-733, and volasertib.
- Single-cell analysis showed varied cellular responses to Hh stimulation, suggesting a mechanism for graded pathway activation.
Conclusions:
- The developed fluorescent sensor assay is a valuable tool for studying Hh pathway activation.
- The findings provide new molecular targets and insights into the regulation of Smo.
- The assay enables dissection of the cell biological mechanisms underlying Hh signalling.
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