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Updated: Feb 19, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
Gorlin syndrome-derived induced pluripotent stem cells are hypersensitive to hedgehog-mediated osteogenic induction
Daigo Hasegawa1, Hiromi Ochiai-Shino2, Shoko Onodera2
1Department of Oral and Maxillofacial Surgery, Tokyo Dental College, Tokyo, Japan.
Abstract:
Gorlin syndrome is an autosomal dominant inherited syndrome that predisposes a patient to the formation of basal cell carcinomas, odontogenic keratocysts, and skeletal anomalies. Causative mutations in several genes associated with the sonic hedgehog (SHH) signaling pathway, including PTCH1, have been identified in Gorlin syndrome patients. However, no definitive genotype-phenotype correlations are evident in these patients, and their clinical presentation varies greatly, often leading to delayed diagnosis and treatment. We generated iPSCs from four unrelated Gorlin syndrome patients with loss-of-function mutations in PTCH1 using the Sendai virus vector (SeVdp(KOSM)302). The patient-derived iPSCs exhibited basic iPSC features, including stem cell marker expression, totipotency, and the ability to form teratomas. GLI1 expression levels were greater in fibroblasts and patient-derived iPSCs than in the corresponding control cells. Patient-derived iPSCs expressed lower basal levels than control iPSCs of the genes encoding the Hh ligands Indian Hedgehog (IHH) and SHH, the Hh acetyltransferase HHAT, Wnt proteins, BMP4, and BMP6. Most of these genes were upregulated in patient-derived iPSCs grown in osteoblast differentiation medium (OBM) and downregulated in control iPSCs cultured in OBM. The expression of GLI1 and GLI2 substantially decreased in both control and patient-derived iPSCs cultured in OBM, whereas GLI3, SHH, and IHH were upregulated in patient-derived iPSCs and downregulated in control iPSCs grown in OBM. Activation of Smoothened by SAG in cells grown in OBM significantly enhanced alkaline phosphatase activity in patient-derived iPSCs compared with control iPSC lines. In summary, patient-derived iPSCs expressed lower basal levels than the control iPSCs of the genes encoding Hh, Wnt, and bone morphogenetic proteins, but their expression of these genes strongly increased under osteogenic conditions. These findings indicate that patient-derived iPSCs are hypersensitive to osteogenic induction. We propose that Hh signaling is constituently active in iPSCs from Gorlin syndrome patients, enhancing their response to osteogenic induction and contributing to disease-associated abnormalities.
Insights
Gorlin syndrome patients' iPSCs show altered gene expression in the sonic hedgehog (SHH) pathway, indicating hypersensitivity to bone formation cues. This discovery may improve understanding of Gorlin syndrome pathogenesis.
Area of Science:
- Genetics and Developmental Biology
- Stem Cell Research
- Signaling Pathways
Background:
- Gorlin syndrome, an autosomal dominant disorder, involves basal cell carcinomas, keratocysts, and skeletal anomalies.
- Causative mutations in PTCH1 within the sonic hedgehog (SHH) pathway are linked to Gorlin syndrome.
- Clinical variability and lack of genotype-phenotype correlations complicate diagnosis and treatment.
Purpose of the Study:
- To investigate the behavior of patient-derived induced pluripotent stem cells (iPSCs) from Gorlin syndrome.
- To explore the role of SHH signaling in Gorlin syndrome pathogenesis using iPSCs.
- To identify potential molecular mechanisms underlying disease-associated abnormalities.
Main Methods:
- Generated iPSCs from four Gorlin syndrome patients with PTCH1 loss-of-function mutations.
- Assessed iPSC characteristics, including stem cell marker expression and teratoma formation.
- Analyzed gene expression (GLI1, IHH, SHH, HHAT, Wnt, BMP4, BMP6, GLI2, GLI3) under basal and osteogenic differentiation conditions.
- Evaluated alkaline phosphatase activity following Smoothened activation.
Main Results:
- Patient-derived iPSCs exhibited typical iPSC features and increased GLI1 expression.
- Basal expression of Hh ligands, HHAT, Wnt, and BMPs was lower in patient iPSCs compared to controls.
- Osteogenic induction upregulated Hh, Wnt, and BMP genes in patient iPSCs but downregulated them in controls.
- Patient iPSCs showed enhanced alkaline phosphatase activity upon Smoothened activation, indicating hypersensitivity to osteogenic induction.
Conclusions:
- Gorlin syndrome patient-derived iPSCs display altered basal and osteogenic gene expression profiles.
- These iPSCs are hypersensitive to osteogenic induction, suggesting a role for constitutive Hh pathway activity.
- Findings provide insights into the molecular basis of Gorlin syndrome abnormalities and highlight the utility of patient-derived iPSCs.

