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Published on: October 12, 2017
Genome-wide linkage and association study implicates the 10q26 region as a major genetic contributor to primary
John M Darlow1,2, Rebecca Darlay3, Mark G Dobson1,2
1Department of Clinical Genetics, Our Lady's Children's Hospital, Crumlin, Dublin 12, Ireland.
Insights
Vesicoureteric reflux (VUR), a common childhood urinary issue, is strongly linked to a specific region on chromosome 10q26. This genetic finding offers new insights into the causes of VUR and related kidney problems.
Area of Science:
- Genetics
- Urology
- Pediatrics
Background:
- Vesicoureteric reflux (VUR) is the most frequent urological anomaly in children.
- Associated renal lesions can lead to childhood hypertension and renal failure.
- Primary VUR has a significant familial component and is genetically heterogeneous.
Purpose of the Study:
- To identify genetic loci predisposing to vesicoureteric reflux (VUR).
- To investigate the genetic architecture of VUR in European populations.
Main Methods:
- Genome-wide linkage and association study in three European populations.
- Analysis of 1098 parent-affected-child trios and 1147 cases/3789 controls.
- Parametric linkage analysis of 460 families (1062 affected individuals) under a dominant model.
Main Results:
- No compelling associations were found through family-based or case/control analyses.
- Parametric linkage analysis identified a strong linkage to VUR on chromosome 10q26 (HLOD = 4.90).
- The ~9Mb region on 10q26 contains 69 genes, with FOXI2, FANK1, and GLRX3 as potential candidates.
Conclusions:
- The 10q26 region is a significant genetic contributor to VUR in European populations.
- This study represents the largest genetic investigation of VUR to date.
- Further investigation of candidate genes within the 10q26 region is warranted.
Abstract:
Vesicoureteric reflux (VUR) is the commonest urological anomaly in children. Despite treatment improvements, associated renal lesions - congenital dysplasia, acquired scarring or both - are a common cause of childhood hypertension and renal failure. Primary VUR is familial, with transmission rate and sibling risk both approaching 50%, and appears highly genetically heterogeneous. It is often associated with other developmental anomalies of the urinary tract, emphasising its etiology as a disorder of urogenital tract development. We conducted a genome-wide linkage and association study in three European populations to search for loci predisposing to VUR. Family-based association analysis of 1098 parent-affected-child trios and case/control association analysis of 1147 cases and 3789 controls did not reveal any compelling associations, but parametric linkage analysis of 460 families (1062 affected individuals) under a dominant model identified a single region, on 10q26, that showed strong linkage (HLOD = 4.90; ZLRLOD = 4.39) to VUR. The ~9Mb region contains 69 genes, including some good biological candidates. Resequencing this region in selected individuals did not clearly implicate any gene but FOXI2, FANK1 and GLRX3 remain candidates for further investigation. This, the largest genetic study of VUR to date, highlights the 10q26 region as a major genetic contributor to VUR in European populations.
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