Phosphorylated Calmodulin Promotes PI3K Activation by Binding to the SH2 Domains
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Updated: Feb 19, 2026

Pull-down of Calmodulin-binding Proteins
Published on: January 23, 2012
Mingzhen Zhang1, Hyunbum Jang1, Vadim Gaponenko2
1Cancer and Inflammation Program, Leidos Biomedical Research, Frederick National Laboratory for Cancer Research, National Cancer Institute at Frederick, Frederick, Maryland.
Abstract:
How calmodulin (CaM) acts in KRAS-driven cancers is a vastly important question. CaM binds to and stimulates PI3Kα/Akt signaling, promoting cell growth and proliferation. Phosphorylation of CaM at Tyr99 (pY99) enhances PI3Kα activation. PI3Kα is a lipid kinase. It phosphorylates PIP2 to produce PIP3, to which Akt binds. PI3Kα has two subunits: the regulatory p85 and the catalytic p110. Here, exploiting explicit-solvent MD simulations we unveil key interactions between phosphorylated CaM (pCaM) and the two SH2 domains in the p85 subunit, confirm experimental observations, and uncover PI3Kα's mechanism of activation. pCaMs form strong and stable interactions with both nSH2 and cSH2 domains, with pY99 being the dominant contributor. Despite the high structural similarity between the two SH2 domains, we observe that nSH2 prefers an extended CaM conformation, whereas cSH2 prefers a collapsed conformation. Notably, collapsed CaM is observed after binding of an extended CaM to K-Ras4B. Thus, the more populated extended pCaM conformation targets nSH2 to release its autoinhibition of p110 catalytic sites. This executes the key activation step of PI3Kα. Independently, K-Ras4B allosterically activates p110. These events are at the cell membrane, which contributes to tighten the PI3Kα Ras binding domain/K-Ras4B interaction, to accomplish K-Ras4B allosteric activation, with a minor contribution from cSH2.
Insights
Phosphorylated calmodulin (pCaM) activates PI3Kα signaling in KRAS cancers by interacting with SH2 domains on the p85 subunit. This interaction, particularly with nSH2, releases p110 inhibition, promoting cell growth.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- Calmodulin (CaM) plays a critical role in KRAS-driven cancers by stimulating PI3Kα/Akt signaling.
- Phosphorylation of CaM at Tyr99 (pY99) enhances PI3Kα activation, a key lipid kinase involved in cell growth and proliferation.
- PI3Kα comprises regulatory p85 and catalytic p110 subunits.
Purpose of the Study:
- To elucidate the mechanism by which phosphorylated CaM (pCaM) interacts with and activates PI3Kα.
- To investigate the role of pCaM's Tyr99 phosphorylation in PI3Kα activation.
- To understand the interplay between pCaM, K-Ras4B, and PI3Kα at the cell membrane.
Main Methods:
- Explicit-solvent molecular dynamics (MD) simulations were employed to study pCaM-PI3Kα interactions.
- Analysis focused on the binding of pCaM to the SH2 domains (nSH2 and cSH2) of the p85 subunit.
- Investigated conformational changes in CaM upon binding to K-Ras4B and PI3Kα.
Main Results:
- pCaM forms stable interactions with both nSH2 and cSH2 domains of p85, with pY99 being crucial.
- nSH2 prefers an extended pCaM conformation, while cSH2 prefers a collapsed conformation.
- The extended pCaM conformation bound to nSH2 releases p110 autoinhibition, representing a key PI3Kα activation step.
Conclusions:
- pCaM binding to nSH2 is the primary mechanism for PI3Kα activation in KRAS-driven cancers.
- K-Ras4B allosterically activates p110 independently, with membrane localization enhancing PI3Kα-K-Ras4B interactions.
- This study reveals detailed molecular interactions driving PI3Kα activation crucial for cancer cell proliferation.
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