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Published on: June 26, 2018
Nature is the best source of anticancer drugs: Indexing natural products for their anticancer bioactivity
Anwar Rayan1,2, Jamal Raiyn1, Mizied Falah3,4
1Drug Discovery Informatics Lab, QRC - Qasemi Research Center, Al-Qasemi Academic College, Baka EL-Garbiah, Israel.
Abstract:
Cancer is considered one of the primary diseases that cause morbidity and mortality in millions of people worldwide and due to its prevalence, there is undoubtedly an unmet need to discover novel anticancer drugs. However, the traditional process of drug discovery and development is lengthy and expensive, so the application of in silico techniques and optimization algorithms in drug discovery projects can provide a solution, saving time and costs. A set of 617 approved anticancer drugs, constituting the active domain, and a set of 2,892 natural products, constituting the inactive domain, were employed to build predictive models and to index natural products for their anticancer bioactivity. Using the iterative stochastic elimination optimization technique, we obtained a highly discriminative and robust model, with an area under the curve of 0.95. Twelve natural products that scored highly as potential anticancer drug candidates are disclosed. Searching the scientific literature revealed that few of those molecules (Neoechinulin, Colchicine, and Piperolactam) have already been experimentally screened for their anticancer activity and found active. The other phytochemicals await evaluation for their anticancerous activity in wet lab.
Insights
Researchers developed a computational model to identify potential anticancer drugs from natural products. This approach accelerates the discovery of novel cancer treatments, with twelve promising candidates identified for further investigation.
Area of Science:
- Computational chemistry
- Drug discovery
- Natural product chemistry
Background:
- Cancer poses a significant global health burden, driving the need for new anticancer therapies.
- Traditional drug discovery is time-consuming and costly, necessitating innovative approaches.
- In silico methods offer a promising solution to expedite and reduce the expense of identifying new drug candidates.
Purpose of the Study:
- To develop predictive models for identifying natural products with potential anticancer activity.
- To screen a large dataset of natural products for novel anticancer drug leads.
- To leverage computational techniques to accelerate anticancer drug discovery.
Main Methods:
- Utilized a dataset of 617 approved anticancer drugs (active domain) and 2,892 natural products (inactive domain).
- Employed the iterative stochastic elimination optimization technique to build predictive models.
- Validated model performance using the area under the curve (AUC) metric.
Main Results:
- Achieved a highly discriminative and robust predictive model with an AUC of 0.95.
- Identified twelve natural products with high scores as potential anticancer drug candidates.
- Literature search confirmed prior anticancer activity for Neoechinulin, Colchicine, and Piperolactam; others await evaluation.
Conclusions:
- In silico modeling is effective for predicting anticancer bioactivity in natural products.
- The study identified novel phytochemicals as potential leads for anticancer drug development.
- This computational approach significantly aids in prioritizing natural products for experimental validation in cancer research.
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