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The Structure of a Conserved Domain of TamB Reveals a Hydrophobic β Taco Fold
Inokentijs Josts1, Christopher James Stubenrauch2, Grishma Vadlamani2
1The Hamburg Centre for Ultrafast Imaging (CUI), Institute for Biochemistry and Molecular Biology, University of Hamburg, Martin-Luther-King-Platz 6, 20146 Hamburg, Germany; Department of Chemistry, Institute for Biochemistry and Molecular Biology, University of Hamburg, Martin-Luther-King-Platz 6, 20146 Hamburg, Germany.
Abstract:
The translocation and assembly module (TAM) plays a role in the transport and insertion of proteins into the bacterial outer membrane. TamB, a component of this system spans the periplasmic space to engage with its partner protein TamA. Despite efforts to characterize the TAM, the structure and mechanism of action of TamB remained enigmatic. Here we present the crystal structure of TamB amino acids 963-1,138. This region represents half of the conserved DUF490 domain, the defining feature of TamB. TamB963-1138 consists of a concave, taco-shaped β sheet with a hydrophobic interior. This β taco structure is of dimensions capable of accommodating and shielding the hydrophobic side of an amphipathic β strand, potentially allowing TamB to chaperone nascent membrane proteins from the aqueous environment. In addition, sequence analysis suggests that the structure of TamB963-1138 is shared by a large portion of TamB. This architecture could allow TamB to act as a conduit for membrane proteins.
Insights
The translocation and assembly module (TAM) protein TamB
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- The translocation and assembly module (TAM) facilitates protein transport into the bacterial outer membrane.
- TamB is a key component of the TAM system, but its structure and function remain poorly understood.
Purpose of the Study:
- To elucidate the structure and potential mechanism of TamB, a crucial protein in bacterial outer membrane biogenesis.
Main Methods:
- X-ray crystallography was used to determine the structure of a significant portion of TamB (amino acids 963-1,138).
- Bioinformatic sequence analysis was performed to infer the broader structural characteristics of TamB.
Main Results:
- The crystal structure of TamB963-1138 revealed a taco-shaped β-sheet with a hydrophobic interior.
- This unique structure is capable of binding and shielding hydrophobic protein segments, suggesting a chaperone role.
Conclusions:
- The identified β-taco structure of TamB likely enables it to chaperone nascent membrane proteins.
- This structural insight provides a potential mechanism for TamB acting as a conduit in protein transport across the periplasmic space.
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