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Structural basis for tRNA-dependent cysteine biosynthesis.

Meirong Chen1, Koji Kato1,2, Yume Kubo1

  • 1Graduate School of Life Science, Hokkaido University, Sapporo, 060-0810, Japan.

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|November 17, 2017
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Summary
This summary is machine-generated.

A novel ternary complex, the transsulfursome, facilitates cysteine biosynthesis through tRNA-dependent mechanisms. This complex, involving SepRS, SepCysS, and SepCysE proteins, ensures efficient and accurate synthesis of cysteine for the genetic code.

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Area of Science:

  • Biochemistry
  • Molecular Biology
  • Structural Biology

Background:

  • Cysteine biosynthesis occurs via a two-step indirect tRNA-dependent pathway.
  • O-phosphoseryl-tRNA synthetase (SepRS) and Sep-tRNA:Cys-tRNA synthase (SepCysS) are key enzymes.
  • In ancestral methanogens, SepCysE forms a ternary complex, the transsulfursome, with SepRS and SepCysS.

Purpose of the Study:

  • To elucidate the structural basis and mechanism of the transsulfursome.
  • To understand how SepCysE mediates tRNACys channeling between SepRS and SepCysS.
  • To explore the implications for cysteine biosynthesis and its evolutionary origin.

Main Methods:

  • X-ray crystallography
  • Small-angle X-ray scattering (SAXS)
  • Electron microscopy (EM)
  • Biochemical assays

Main Results:

  • The three domains of SepCysE bind SepRS, SepCysS, and tRNACys respectively.
  • SepCysE mediates the dynamic architecture of the transsulfursome.
  • Long-range channeling of tRNACys between distant active sites of SepRS and SepCysS is enabled.

Conclusions:

  • The transsulfursome facilitates efficient and accurate tRNA-dependent cysteine biosynthesis.
  • This channeling mechanism prevents translational fidelity challenges.
  • The findings suggest a potential mechanism for the original incorporation of cysteine into the genetic code.