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Published on: January 24, 2016
The DNA Pol ϵ stimulatory activity of Mrc1 is modulated by phosphorylation
Zhong-Xin Zhang1, Jingjing Zhang1, Qinhong Cao1
1a Beijing Advanced Innovation Center for Food Nutrition and Human Health , State Key Laboratory of Agrobiotechnology , MOA Key Laboratory of Soil Microbiology , College of Biological Sciences , China Agricultural University , Beijing 100193 , China.
Abstract:
DNA replication checkpoint (Mec1-Mrc1-Rad53 in budding yeast) is an evolutionarily conserved surveillance system to ensure proper DNA replication and genome stability in all eukaryotes. Compared to its well-known function as a mediator of replication checkpoint, the exact role of Mrc1 as a component of normal replication forks remains relatively unclear. In this study, we provide in vitro biochemical evidence to support that yeast Mrc1 is able to enhance the activity of DNA polymerase ϵ (Pol ϵ), the major leading strand replicase. Mrc1 can selectively bind avidly to primer/template DNA bearing a single-stranded region, but not to double-stranded DNA (dsDNA). Mutations of the lysine residues within basic patch 1 (BP1) compromise both DNA binding and polymerase stimulatory activities. Interestingly, Mrc1-3D, a mutant mimicking phosphorylation by the Hog1/MAPK kinase during the osmotic stress response, retains DNA binding but not polymerase stimulation. The stimulatory effect is also abrogated in Mrc1 purified from cells treated with hydroxyurea (HU), which elicits replication checkpoint activation. Taken together with previous findings, these results imply that under unperturbed condition, Mrc1 has a DNA synthesis stimulatory activity, which can be eliminated via Mrc1 phosphorylation in response to replication and/or osmotic stresses.
Insights
The DNA replication checkpoint protein Mrc1 enhances DNA polymerase epsilon activity during normal replication. Stress-induced phosphorylation of Mrc1 eliminates this stimulatory function, ensuring genome stability.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- The DNA replication checkpoint (Mec1-Mrc1-Rad53 in budding yeast) is crucial for genome stability in eukaryotes.
- Mrc1's role in normal replication forks, beyond checkpoint mediation, is not fully understood.
Purpose of the Study:
- To investigate the function of yeast Mrc1 in DNA replication.
- To determine if Mrc1 directly impacts DNA polymerase activity.
Main Methods:
- In vitro biochemical assays using purified yeast Mrc1 and DNA polymerase epsilon.
- DNA binding assays with various DNA substrates.
- Analysis of Mrc1 mutants and Mrc1 from stressed cells.
Main Results:
- Yeast Mrc1 enhances the activity of DNA polymerase epsilon, the leading strand replicase.
- Mrc1 binds specifically to primer/template DNA but not double-stranded DNA.
- Mutations in Mrc1's basic patch 1 disrupt DNA binding and polymerase stimulation.
- Phosphorylation mimicking Mrc1-3D or Mrc1 from hydroxyurea-treated cells loses polymerase stimulatory activity.
Conclusions:
- Mrc1 possesses a DNA synthesis stimulatory role under unperturbed conditions.
- Mrc1 phosphorylation, triggered by replication or osmotic stress, abrogates its stimulatory function.
- This regulation contributes to maintaining genome stability during stress responses.
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