Related Experiment Video
Updated: Feb 18, 2026

Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
Published on: April 11, 2016
Precision Oncology: Between Vaguely Right and Precisely Wrong
1Department of Biomedical Engineering, The University of Texas at Austin, Austin, Texas. amy.brock@austin.utexas.edu sui.huang@systemsbiology.org.
Abstract:
Precision Oncology seeks to identify and target the mutation that drives a tumor. Despite its straightforward rationale, concerns about its effectiveness are mounting. What is the biological explanation for the "imprecision?" First, Precision Oncology relies on indiscriminate sequencing of genomes in biopsies that barely represent the heterogeneous mix of tumor cells. Second, findings that defy the orthodoxy of oncogenic "driver mutations" are now accumulating: the ubiquitous presence of oncogenic mutations in silent premalignancies or the dynamic switching without mutations between various cell phenotypes that promote progression. Most troublesome is the observation that cancer cells that survive treatment still will have suffered cytotoxic stress and thereby enter a stem cell-like state, the seeds for recurrence. The benefit of "precision targeting" of mutations is inherently limited by this counterproductive effect. These findings confirm that there is no precise linear causal relationship between tumor genotype and phenotype, a reminder of logician Carveth Read's caution that being vaguely right may be preferable to being precisely wrong. An open-minded embrace of the latest inconvenient findings indicating nongenetic and "imprecise" phenotype dynamics of tumors as summarized in this review will be paramount if Precision Oncology is ultimately to lead to clinical benefits. Cancer Res; 77(23); 6473-9. ©2017 AACR.
Insights
Precision Oncology faces challenges due to tumor heterogeneity and non-genetic factors. Understanding these complexities is key to improving cancer treatment effectiveness.
Area of Science:
- Oncology
- Genomics
- Cancer Biology
Background:
- Precision Oncology aims to target tumor-driving mutations.
- Growing concerns question the effectiveness of current Precision Oncology approaches.
- Tumor heterogeneity and non-genetic factors complicate targeted therapies.
Purpose of the Study:
- To explore the biological basis for the "imprecision" in Precision Oncology.
- To review evidence challenging the traditional driver mutation hypothesis.
- To discuss the implications of tumor cell plasticity and non-genetic dynamics for cancer treatment.
Main Methods:
- Review of current literature on Precision Oncology.
- Analysis of findings related to tumor heterogeneity and genomic sequencing.
- Examination of studies on oncogenic mutations, cell phenotype switching, and treatment resistance.
Main Results:
- Precision Oncology's reliance on biopsy sequencing may not capture tumor heterogeneity.
- Accumulating evidence suggests mutations may not always be the primary drivers of cancer progression.
- Cancer cells surviving treatment can adopt stem cell-like states, promoting recurrence.
Conclusions:
- There is no simple linear relationship between a tumor's genotype and its phenotype.
- Non-genetic factors and imprecise phenotype dynamics significantly impact tumor behavior.
- Embracing these complex dynamics is crucial for advancing Precision Oncology and achieving clinical benefits.
Related Concept Videos
Combination Therapies and Personalized Medicine
The combination of the drug acetazolamide and sulforaphane is a good example of combination therapy to treat cancer. The cells in the interior of a large tumor often die due to the hypoxic and...
Targeted Cancer Therapies
There are several types of targeted therapies against...
Cancer

