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Updated: Feb 18, 2026

A Protocol for Analyzing Hepatitis C Virus Replication
Published on: June 26, 2014
Heat shock proteins HSPB8 and DNAJC5B have HCV antiviral activity
Ana Claudia Silva Braga1, Bruno Moreira Carneiro1,2, Mariana Nogueira Batista1
1Laboratório de Estudos Genômicos, UNESP/IBILCE, São José do Rio Preto, São Paulo, Brazil.
Insights
Heat shock proteins HSPB8 and DNAJC5B inhibit hepatitis C virus (HCV) replication. Upregulating HSPB8 reduces HCV replication, while silencing it increases viral load, suggesting a protective role against HCV infection.
Area of Science:
- Hepatology
- Virology
- Molecular Biology
Background:
- Hepatitis C virus (HCV) infection affects millions globally, with viral replication involving host cellular proteins.
- Heat shock proteins (HSPs) exhibit altered expression during HCV infection and some directly interact with viral proteins.
Purpose of the Study:
- To investigate the role of heat shock proteins (HSPs) in hepatitis C virus (HCV) replication.
- To identify specific HSPs that influence HCV replication and understand their interaction mechanisms.
Main Methods:
- Differential expression analysis of 84 HSPs and chaperones using qPCR array in HCV-infected vs. uninfected cells.
- Validation of differentially expressed genes via real-time PCR in three distinct HCV models (SGR-JFH-1, JFH-1, S52).
- Gene silencing and overexpression experiments for HSPB8 and DNAJC5B to assess their impact on viral replication; co-immunoprecipitation to study protein interactions.
Main Results:
- HSPB8 and DNAJC5B expression increased in all tested HCV models.
- Silencing HSPB8 or DNAJC5B enhanced HCV replication, whereas their overexpression reduced it.
- HCV NS4B protein was found to directly interact with HSPB8.
Conclusions:
- HSPB8 and DNAJC5B function as intracellular factors that inhibit hepatitis C virus replication, particularly for genotype 3.
- The interaction between HCV NS4B and HSPB8 provides insight into the host-pathogen mechanisms during HCV infection.
Abstract:
Hepatitis C is a disease caused by the hepatitis C virus (HCV), and an estimated 3% of the world population is infected with the virus. During replication, HCV interacts with several cellular proteins. Studies have shown that several heat shock proteins (HSPs) have an altered expression profile in the presence of the virus, and some HSPs interact directly with HCV proteins. In the present study, we evaluated the expression levels of heat shock proteins in vitro in the presence and absence of HCV. The differential expression of 84 HSPs and chaperones was observed using a qPCR array, comparing HCV uninfected and infected Huh7.5 cells. To validate qPCR array, the differentially expressed genes were tested by real-time PCR in three different HCV models: subgenomic HCV replicon cells (SGR-JFH-1), JFH-1 infected cells (both genotype 2a) and subgenomic S52 cells (genotype 3). The HSPB8 gene showed increased expression in all three viral models. We silenced HSPB8 expression and observed an increase in viral replication. In contrast, when we increased the expression of HSPB8, a decrease in the HCV replication rate was observed. The same procedure was adopted for DNAJC5B, and HCV showed a similar replication pattern as that observed for HSPB8. These results suggest that HSPB8 may act as an intracellular factor against hepatitis C virus replication and that DNAJC5B has the same function, with more relevant results for genotype 3. We also evaluated the direct interactions between HCV and HSP proteins, and the IP experiments showed that the HCV NS4B protein interacts with HSPB8. These results contribute to a better understanding of the mechanisms involved in HCV replication.
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