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Related Experiment Video

Updated: Feb 17, 2026

In Silico Identification and Characterization of circRNAs During Host-Pathogen Interactions
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shinyCircos: an R/Shiny application for interactive creation of Circos plot.

Yiming Yu1, Yidan Ouyang1, Wen Yao1,2

  • 1National Key Laboratory of Crop Genetic Improvement, National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, China.

Bioinformatics (Oxford, England)
|November 30, 2017
PubMed
Summary

shinyCircos is a new R/Shiny application that simplifies the creation of Circos plots for genomic data visualization. This tool offers a user-friendly graphical interface, making complex visualizations accessible to researchers without coding experience.

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Area of Science:

  • Genomics
  • Bioinformatics
  • Data Visualization

Background:

  • Circos plots are essential for visualizing genomic data.
  • Existing Circos plot tools often require coding expertise, posing a barrier for many researchers.

Purpose of the Study:

  • To develop an accessible R/Shiny application for creating Circos plots.
  • To provide a user-friendly graphical interface for genomic data visualization.

Main Methods:

  • Development of an R/Shiny application named shinyCircos.
  • Implementation of a graphical user interface (GUI) for interactive Circos plot generation.
  • Ensuring easy installation on personal computers or servers for community-wide access.

Main Results:

  • shinyCircos offers an intuitive GUI for Circos plot creation.
  • Users can generate and customize various Circos plot types with simple clicks.
  • The application is easily installable and accessible for both individual and community use.

Conclusions:

  • shinyCircos effectively lowers the barrier to entry for creating complex genomic visualizations.
  • The application democratizes the use of Circos plots in research.
  • shinyCircos enhances the accessibility of genomic data visualization tools.