ATM and CDK2 control chromatin remodeler CSB to inhibit RIF1 in DSB repair pathway choice

Nicole L Batenburg1, John R Walker1, Sylvie M Noordermeer2,3

  • 1Department of Biology, McMaster University, Hamilton, Ontario, L8S 4K1, Canada.

Nature Communications
|December 6, 2017
PubMed

Insights

Cockayne syndrome group B (CSB) protein recruits to DNA breaks in S phase via interaction with RIF1. CSB

Area of Science:

  • Molecular Biology
  • DNA Repair Mechanisms
  • Chromatin Remodeling

Background:

  • Cockayne syndrome group B (CSB) is a member of the SWI2/SNF2 superfamily involved in DNA double-strand break (DSB) repair.
  • The precise regulatory mechanisms of CSB in DSB repair remain largely unelucidated.

Purpose of the Study:

  • To investigate the interaction partners and regulatory mechanisms of CSB in DNA double-strand break repair.
  • To elucidate how CSB's chromatin remodeling activity is controlled during the DNA damage response.

Main Methods:

  • Identified a novel winged helix domain in CSB responsible for RIF1 interaction.
  • Investigated CSB recruitment to DSBs in S phase.
  • Assessed CSB's chromatin remodeling activity, including histone eviction and recruitment of repair factors like BRCA1, RIF1, and MAD2L2.
  • Analyzed the role of ATM and cyclin A-CDK2 phosphorylation in modulating CSB activity.

Main Results:

  • CSB interacts with RIF1, an effector of 53BP1, via a newly identified winged helix domain, mediating CSB recruitment to DSBs during S phase.
  • CSB remodels chromatin at DSBs by evicting histones, limiting RIF1/MAD2L2 but promoting BRCA1 accumulation.
  • CSB chromatin remodeling activity is regulated by ATM-mediated phosphorylation at S10 and cyclin A-CDK2-mediated phosphorylation at S158.

Conclusions:

  • CSB's interaction with RIF1 is crucial for its recruitment to DSBs in S phase.
  • CSB's chromatin remodeling function is modulated by ATM and CDK2, influencing DSB repair pathway choice.
  • These findings reveal a novel regulatory pathway for CSB in orchestrating DNA repair.

Related Concept Videos

DNA Damage can Stall the Cell Cycle02:36

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
10.2K
DNA Damage Can Stall the Cell Cycle02:36

DNA Damage Can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
3.2K
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
6.4K
Inhibition of Cdk Activity02:34

Inhibition of Cdk Activity

The orderly progression of the cell cycle depends on the activation of Cdk protein by binding to its cyclin partner. However, the cell cycle must be restricted when undergoing abnormal changes. Most cancers correlate to the deregulated cell cycle, and since Cdks are a central component of the cell cycle, Cdk inhibitors are extensively studied to develop anticancer agents. For instance, cyclin D associates with several Cdks, such as Cdk 4/6, to form an active complex. The cyclin D-Cdk4/6 complex...
6.1K
S-Cdk Initiates DNA Replication02:38

S-Cdk Initiates DNA Replication

The cell cycle is a series of events leading to DNA duplication followed by the division of cell content to form two daughter cells. The cell cycle progresses in four stages—the cell increases in size (gap 1 or G1-phase), duplicates its DNA (synthesis or S-phase), prepares to divide (gap 2 or G2-phase), and divides (mitosis or M-phase).
Two states at the origin of replication
In eukaryotes, the initiation of replication occurs at many sites on the chromosomes, called the origins of...
5.7K
Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
16.8K