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Characterization of Functionally Associated miRNAs in Glioblastoma and their Engineering into Artificial Clusters for Gene Therapy
Published on: October 4, 2019
p53 and miR-210 regulated NeuroD2, a neuronal basic helix-loop-helix transcription factor, is downregulated in
Rahul Agrawal1, Ankita Garg1, Prit Benny Malgulwar2
1Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology Delhi, New Delhi, India.
Abstract:
The factors involved in cell differentiation have recently garnered interest for their role in inhibition of pathogenesis in various tumors. However, their role in glioblastoma (GBM) remains poorly understood. We analyzed The Cancer Genome Atlas (TCGA) GBM data and found significant downregulation of neurogenic differentiation factor NeuroD2 in GBM patients. Low levels of NeuroD2 were found to be correlated with poor overall survival of GBM patients in TCGA dataset as well as in our cohort. Interestingly, NeuroD2 was shown to be transcriptionally induced by p53 and post-transcriptionally targeted by hypoxia- inducible miRNA, miR-210. NeuroD2 overexpression diminished GBM aggressiveness by inhibiting cell proliferation, migration and promoting apoptosis under hypoxia. NeuroD2 overexpressing GBM cells failed to form three-dimensional (3D)-tumor spheroids and displayed reduced migration in a 3D gelatin matrix. NeuroD2 gene signature was enriched in pathways belonging to cytokine-cytokine receptor interaction, TNF-signaling, PI3K-AKT signaling, focal adhesion and ECM-receptor interaction. Overall, our study identifies a novel role of NeuroD2 as a tumor suppressor and prognostic biomarker in GBM the levels of which are tightly regulated by p53 and miR-210. Overexpressing NeuroD2 may potentially be a simple and efficient therapeutic strategy to inhibit the malignant phenotype of GBM cells.
Insights
Neurogenic differentiation factor NeuroD2 is downregulated in glioblastoma (GBM), correlating with poor survival. Its overexpression suppresses GBM aggressiveness, suggesting a potential therapeutic strategy.
Area of Science:
- Neuro-oncology
- Cancer Biology
- Molecular Oncology
Background:
- Cell differentiation factors are implicated in tumor pathogenesis but their role in glioblastoma (GBM) is unclear.
- Glioblastoma (GBM) is an aggressive brain tumor with limited therapeutic options.
Purpose of the Study:
- To investigate the role of neurogenic differentiation factor NeuroD2 in glioblastoma (GBM).
- To explore NeuroD2 as a potential prognostic biomarker and therapeutic target in GBM.
Main Methods:
- Analysis of The Cancer Genome Atlas (TCGA) GBM data and a patient cohort.
- Investigation of NeuroD2 regulation by p53 and miR-210.
- Assessment of NeuroD2's effect on GBM cell proliferation, migration, apoptosis, and 3D spheroid formation under hypoxia.
Main Results:
- NeuroD2 is significantly downregulated in GBM, correlating with reduced patient survival.
- NeuroD2 is induced by p53 and targeted by miR-210.
- NeuroD2 overexpression inhibits GBM cell proliferation, migration, and 3D growth, while promoting apoptosis, particularly under hypoxia.
- Enrichment analysis revealed NeuroD2 gene signature in pathways like cytokine-cytokine receptor interaction and PI3K-AKT signaling.
Conclusions:
- NeuroD2 acts as a tumor suppressor and prognostic biomarker in GBM.
- NeuroD2 levels are regulated by p53 and miR-210.
- Overexpressing NeuroD2 presents a potential therapeutic strategy against GBM.
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