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Updated: Feb 16, 2026

Free Radicals in Chemical Biology: from Chemical Behavior to Biomarker Development
Published on: April 15, 2013
SOMO-HOMO Level Inversion in Biologically Important Radicals.
Anil Kumar1, Michael D Sevilla1
1Department of Chemistry, Oakland University , Rochester, Michigan 48309, United States.
Singly occupied molecular orbital (SOMO) level inversion is common in radicals, where the SOMO is lower than the highest occupied molecular orbital (HOMO). This impacts radical reactivity and electronic properties, challenging conventional assumptions.
Area of Science:
- Quantum Chemistry
- Molecular Orbital Theory
- Free Radical Chemistry
Background:
- Traditionally, the singly occupied molecular orbital (SOMO) is assumed to be the highest occupied molecular orbital (HOMO) in radical species.
- This assumption is challenged by observations of SOMO-HOMO level inversion in various radical systems.
Purpose of the Study:
- To investigate the phenomenon of SOMO-HOMO level inversion in a diverse range of radical species.
- To determine the factors influencing the energy gap between SOMO and HOMO.
- To elucidate the implications of this inversion on radical reactivity and electronic configurations.
Main Methods:
- Computational electronic structure calculations using the B3LYP/6-31++G** method.
- Inclusion of aqueous phase effects using the integral equation formalism of the polarized continuum model (PCM) solvation model.
- Analysis of electronic configurations for natural DNA bases, substituted bases, and diatomic molecules.
Main Results:
- SOMO-HOMO level inversion is identified as a prevalent phenomenon across various radical species, including diatomic anions and oxidized DNA bases.
- A greater localization of spin density in a σ-orbital on a single atom correlates with an increased energy gap between the HOMO and SOMO.
- In systems exhibiting SOMO-HOMO inversion, one-electron oxidation occurs from the HOMO, leading to triplet ground states, as exemplified by superoxide anion oxidation to triplet oxygen.
Conclusions:
- The study reveals that SOMO-HOMO level inversion is a common characteristic of radical species, contrary to traditional assumptions.
- The findings provide critical insights into the electronic structure and reactivity of radicals, particularly concerning oxidation processes.
- The results highlight differences between conventional radicals and distonic radical anions regarding SOMO-HOMO inversion and its dependence on localization and solvent effects.
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