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A Rat Methyl-Seq Platform to Identify Epigenetic Changes Associated with Stress Exposure
Published on: October 24, 2018
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"DNA Methylation signatures in panic disorder".
Stella Iurato1, Tania Carrillo-Roa2, Janine Arloth2
1Department of Translational Research in Psychiatry, Max Planck Institute of Psychiatry, Munich, Germany. stellaiurato@outlook.com.
Translational Psychiatry
|December 19, 2017
Summary
This epigenome-wide association study found sex-specific DNA methylation changes in the HECA gene in female panic disorder patients. While not widespread, these findings suggest a potential role for HECA methylation in panic disorder pathogenesis.
Area of Science:
- Neuroscience
- Genetics
- Psychiatry
Background:
- Panic disorder (PD) affects millions, disproportionately women, with unknown causes.
- Genetic and environmental factors are implicated in PD risk.
- Epigenetic modifications, like DNA methylation, may play a role in PD.
Purpose of the Study:
- To investigate epigenome-wide DNA methylation differences in medication-free panic disorder patients compared to healthy controls.
- To explore potential sex-specific epigenetic alterations in PD.
- To identify specific genes and pathways associated with PD through DNA methylation.
Main Methods:
- An epigenome-wide association study (EWAS) using the Infinium HumanMethylation450 BeadChip on whole blood DNA.
- Stratification by gender and replication in independent samples.
- Functional analysis of methylation changes on gene expression.
Main Results:
- A significant genome-wide association identified a hypermethylated CpG locus in the HECA gene enhancer region in female PD patients.
- This finding was replicated and validated through meta-analysis, showing improved significance.
- Methylation at this locus correlated with HECA mRNA expression in females, suggesting a functional link.
- Five other candidate genes (SGK1, FHIT, ADCYAP1, HTR1A, HTR2A) previously linked to PD or anxiety also showed differential DNA methylation.
Conclusions:
- The study identified potential sex-specific DNA methylation changes in the HECA gene associated with panic disorder.
- These findings suggest a possible role for HECA gene methylation in the pathogenesis of PD in females.
- Overall, PD is not associated with extensive DNA methylation changes in peripheral blood, indicating a complex etiology.
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