Related Experiment Video
Updated: Feb 16, 2026

10:16
Employing Digital Droplet PCR to Detect BRAF V600E Mutations in Formalin-fixed Paraffin-embedded Reference Standard Cell Lines
Published on: October 8, 2015
13.7K
BRAF V600E Mutation Across Multiple Tumor Types: Correlation Between DNA-based Sequencing and Mutation-specific
Eric Loo1, Parisa Khalili1, Karen Beuhler2
1Department of Pathology, University of New Mexico Health Sciences.
Applied Immunohistochemistry & Molecular Morphology : AIMM
|December 23, 2017
Summary
A BRAF V600E mutation-specific antibody shows high concordance with DNA sequencing for detecting this common cancer mutation. However, this antibody misses other BRAF V600 variants.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The BRAF proto-oncogene (BRAF) is crucial in the mitogen-activated protein kinase (MAPK) pathway.
- The BRAF V600E mutation is prevalent in various cancers, including melanoma and colorectal carcinoma.
- BRAF inhibitors are effective treatments for BRAF V600E-mutated cancers.
Purpose of the Study:
- To evaluate the concordance between DNA-based sequencing and a BRAF V600E mutation-specific antibody.
- To assess the utility of immunohistochemistry as a cost-effective alternative for BRAF V600E mutation detection.
Main Methods:
- Analysis of multiple tumor types (melanoma, colorectal carcinoma, papillary thyroid cancer, hairy cell leukemia, Langerhans cell histiocytosis).
- Comparison of results from DNA-based sequencing and BRAF V600E mutation-specific antibody testing (immunohistochemistry).
Main Results:
- High concordance was observed between DNA sequencing and the BRAF V600E antibody test.
- The BRAF V600E antibody accurately identifies the V600E mutation.
- Variant V600 mutations (other than V600E) were not detected by the V600E-specific antibody.
Conclusions:
- The BRAF V600E mutation-specific antibody is a reliable and cost-effective method for detecting the V600E mutation in clinical settings.
- Immunohistochemistry using this antibody is a valuable tool, but it cannot replace DNA sequencing for detecting all BRAF V600 variants.

