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Updated: Feb 16, 2026

Peptide-based Identification of Functional Motifs and their Binding Partners
Published on: June 30, 2013
Identification of a novel nucleophosmin-interaction motif in the tumor suppressor p14arf
Enrico Luchinat1,2, Sara Chiarella3,4, Mimma Franceschini3,4
1CERM, Centro Risonanze Magnetiche, Università di Firenze, Italy.
Abstract:
The tumor suppressor p14arf interacts, in response to oncogenic signals, with the p53 E3-ubiquitin ligase HDM2, thereby resulting in p53 stabilization and activation. In addition, it also exerts tumor-suppressive functions in p53-independent contexts. The activities of p14arf are regulated by the nucleolar chaperone nucleophosmin (NPM1), which controls its levels and cellular localization. In acute myeloid leukemia with mutations in the NPM1 gene, mutated NPM1 aberrantly translocates in the cytosol carrying with itself p14arf that is subsequently degraded, thus impairing the p14arf-HDM2-p53 axis. In this work we investigated the complex between these two proteins by means of NMR and other techniques. We identified a novel NPM1-interacting motif in the C-terminal region of p14arf, which corresponds to its predicted nucleolar localization signal. This motif recognizes a specific region of the NPM1 N-terminal domain and, upon binding, the two proteins form soluble high molecular weight complexes. By NMR, we identified critical residues on both proteins involved in the interaction. Collectively, our data provide a structural framework to rationalize the overall assembly of the p14arf-NPM1 supramolecular complexes. A number of p14arf cancer-associated mutations cluster in this motif and their effect on the interaction with NPM1 was also analyzed.
Insights
The tumor suppressor p14ARF interacts with nucleophosmin (NPM1), forming complexes crucial for its tumor-suppressive functions. This study reveals the structural basis of this interaction, important for understanding cancer mutations.
Area of Science:
- Molecular Biology
- Structural Biology
- Oncology
Background:
- The tumor suppressor p14ARF is vital for p53 stabilization and activation via interaction with HDM2, and also exhibits p53-independent tumor-suppressive roles.
- Nucleophosmin (NPM1) regulates p14ARF levels and localization, but its role is disrupted in acute myeloid leukemia (AML) with mutated NPM1, leading to p14ARF degradation and impaired tumor suppression.
- Understanding the p14ARF-NPM1 interaction is critical for deciphering cancer mechanisms and developing therapeutic strategies.
Purpose of the Study:
- To investigate the structural basis of the interaction between p14ARF and NPM1.
- To identify the specific regions and residues involved in the p14ARF-NPM1 complex formation.
- To analyze the impact of cancer-associated mutations in p14ARF on its interaction with NPM1.
Main Methods:
- Nuclear Magnetic Resonance (NMR) spectroscopy was employed to study the p14ARF-NPM1 complex.
- Biochemical techniques were used to analyze protein interactions and complex formation.
- Analysis of p14ARF mutations associated with cancer and their effect on NPM1 binding.
Main Results:
- A novel NPM1-interacting motif was identified in the C-terminal region of p14ARF, which also serves as its nucleolar localization signal.
- This motif binds to a specific region on the NPM1 N-terminal domain, forming soluble, high molecular weight complexes.
- Critical residues on both p14ARF and NPM1 involved in the interaction were identified using NMR, providing a structural framework for the supramolecular complex assembly.
- Several cancer-associated p14ARF mutations were found to cluster within this motif, affecting its interaction with NPM1.
Conclusions:
- The study provides the first structural insights into the p14ARF-NPM1 complex, elucidating the molecular mechanisms underlying their interaction.
- The identified interaction motif and critical residues offer a basis for understanding how NPM1 regulates p14ARF and how mutations disrupt this process in cancer.
- These findings are crucial for understanding the pathogenesis of AML with NPM1 mutations and may guide the development of novel cancer therapies targeting the p14ARF-NPM1 axis.
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