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Updated: Feb 16, 2026

A Practical Guide to Phylogenetics for Nonexperts
Published on: February 5, 2014
New Gromov-Inspired Metrics on Phylogenetic Tree Space
1Department of Mathematics and Computer Science, University of Greifswald, 17487, Greifswald, Germany. volkmar.liebscher@uni-greifswald.de.
Abstract:
We present a new class of metrics for unrooted phylogenetic X-trees inspired by the Gromov-Hausdorff distance for (compact) metric spaces. These metrics can be efficiently computed by linear or quadratic programming. They are robust under NNI operations, too. The local behaviour of the metrics shows that they are different from any previously introduced metrics. The performance of the metrics is briefly analysed on random weighted and unweighted trees as well as random caterpillars.
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