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Updated: Feb 16, 2026

Advanced 3D Liver Models for In vitro Genotoxicity Testing Following Long-Term Nanomaterial Exposure
Published on: June 5, 2020
A three-dimensional in vitro HepG2 cells liver spheroid model for genotoxicity studies
Ume-Kulsoom Shah1, Jefferson de Oliveira Mallia1, Neenu Singh2
1In vitro Toxicology Group, Institute of Life Science, College of Medicine, Swansea University,Singleton Park, Swansea, Wales, SA2 8PP, UK.
This study developed a 3D liver model using HepG2 cells in hanging-drop spheroids for improved genotoxicity testing. The 3D model demonstrated enhanced sensitivity to genotoxic agents compared to 2D cultures, offering a more accurate prediction of human toxicology.
Area of Science:
- Toxicology and Pharmacology
- Biotechnology and Bioengineering
- Cell Biology
Background:
- The liver is crucial for chemical metabolism, making it a key tissue for toxicity testing.
- Current toxicity testing methods (animal and 2D cell models) have limitations in mimicking in vivo liver cell behavior, affecting predictive accuracy for human toxicology.
- Three-dimensional (3D) in vitro liver models present a promising alternative for more relevant toxicity assessments.
Purpose of the Study:
- To develop and characterize a 3D liver model using HepG2 cells cultured in hanging-drop spheroids.
- To evaluate the suitability of this 3D model for genotoxicity testing, specifically using the cytokinesis-blocked micronucleus assay.
- To compare the performance of the 3D hanging-drop spheroid model with traditional 2D cultures for genotoxicity assessment.
Main Methods:
- Development of HepG2 spheroids using the hanging-drop technique with an initial seeding density of 5000 cells/20 µL drop.
- Adaptation of the cytokinesis-blocked micronucleus assay for micronucleus detection in 3D spheroids.
- Evaluation of dosing in hanging vs. non-hanging drops and comparison of automated (Metafer) vs. manual scoring for micronucleus detection.
Main Results:
- HepG2 hanging-drop spheroids maintained >75% cell viability at day 4, with optimal albumin secretion and CYP1A1/CYP1A2 gene expression in the 3D environment.
- Exposure to genotoxicants (B[a]P and PhIP) induced significant increases in CYP1A1 and CYP1A2 enzyme activity in 3D hanging spheroids.
- Micronucleus (MN) induction in response to B[a]P and PhIP was greater in 3D hanging spheroids than in 2D cultures, indicating higher sensitivity to genotoxic agents.
Conclusions:
- HepG2 hanging-drop spheroids represent a novel and improved in vitro system for genotoxicity studies.
- The 3D model exhibits enhanced structural and physiological properties, leading to more sensitive detection of genotoxic effects compared to 2D cultures.
- This 3D liver model offers a more accurate platform for predicting human toxicology and chemical safety assessment.
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