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Quantification of Circular RNAs Using Digital Droplet PCR
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Synthesis and Engineering of Circular RNAs
Sonja Petkovic1, Sabine Müller2
1Institut für Molekulare Medizin, UK S-H, Campus Lübeck, Universität zu Lübeck, Lübeck, Germany.
Methods in Molecular Biology (Clifton, N.J.)
|January 12, 2018
Summary
Researchers developed two novel methods for synthesizing and circularizing circular RNAs (circRNAs), crucial for studying their structure and function in eukaryotes. These protocols enable the creation of modified circRNAs for advanced biological research.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- Circular RNAs (circRNAs) are prevalent across life forms, originating from both introns and exons.
- Eukaryotic circRNAs, particularly those derived from exons of protein-coding and noncoding genes, are of significant research interest.
- The demand for synthesized and engineered circRNAs for structure-function studies is high.
Purpose of the Study:
- To present two distinct protocols for the synthesis and circularization of circular RNAs (circRNAs).
- To provide methods for creating circRNAs suitable for structure and function studies in eukaryotic systems.
- To enable the engineering of circRNAs for advanced biological applications.
Main Methods:
- Described are two alternative protocols for RNA synthesis and circularization.
- Methods include chemical synthesis for small, modified RNA segments and enzymatic synthesis for long RNAs.
- Combined strategies of chemical and enzymatic synthesis are employed to generate long, modified linear RNA strands prior to circularization.
Main Results:
- The study details two viable protocols for producing circular RNAs (circRNAs).
- These methods cater to different downstream applications and template structures.
- The protocols facilitate the synthesis of modified RNA strands for subsequent circularization.
Conclusions:
- The developed protocols offer versatile approaches for circRNA synthesis and engineering.
- These methods are essential for advancing the study of circRNA structure and function.
- The ability to synthesize and modify circRNAs is critical for their application in eukaryotic research.
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