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Published on: January 8, 2015
Construction of an M1GS Ribozyme for Targeted and Rapid mRNA Cleavage; Application on the Ets-2 Oncogene
Chrisavgi Toumpeki1, Dimitrios Anastasakis1, Ioannis Panagoulias2
1Department of Biological Chemistry, School of Medicine, University of Patras, Patras, 26500, Greece.
Background:
RNase P-mediated cleavage of target RNAs has been proposed as a promising tool for gene silencing. Ets-2 proto-oncogene controls the expression of a wide variety of genes involved in cancer and immunity.
Objective:
Construction of a functional RNase P-based ribozyme (M1GS303) that targets Ets-2 mRNA.
Methods:
The accessible sites for targeting of Ets-2 mRNA were identified by footprinting analysis. M1GS303 ribozyme was constructed by cloning. The activity of the ribozyme in the presence or absence of spiramysin in E. coli cells and human cell lines was quantified by RT-PCR. The efficiency of the ribozyme in silencing the endogenous expression of Ets-2 in human cell lines was examined by RT-PCR, western blot and immunofluorescence analysis.
Results:
In E. coli cells co-transformed with plasmids bearing M1GS303 and the ets-2 target gene, Ets-2 mRNA was decreased by 93% 12h after IPTG induction in the absence, and after 4h in the presence of spiramycin. Ets-2 was rapidly downregulated in the human embryonic kidney cell line HEK293 and the T-cell line Jurkat transfected with an M1GS303 plasmid; the silencing effect of M1GS303 was considerably faster when the cells were cultured with spiramycin. In Jurkat cells, Ets-2-downregulation resulted in upregulation of the expression of IL-2, IL-4 and IFN-α cytokine genes that have Ets-2 binding sites on their promoters, whereas it had no effect on the expression of the IL-10 gene that lacks Ets-2 binding sites on its promoter.
Conclusions:
M1GS303 ribozyme cleaves effectively Ets-2 mRNA in bacteria and mammalian cells, and its activity is enhanced by spiramycin. Downregulation of ets-2 gene in the T-cell line Jurkat upregulates IL-2, IL-4 and IFN-α cytokine genes. M1GS technology may be a better alternative to conventional gene-interference therapies and the delineation of the effects of gene silencing in various pathologies.
Insights
This study developed a novel ribozyme (M1GS303) that effectively silences Ets-2 mRNA in bacteria and human cells, with enhanced activity when combined with spiramycin. This M1GS technology shows promise as an alternative to traditional gene-interference therapies.
Area of Science:
- Molecular Biology
- Gene Regulation
- Biotechnology
Background:
- Ribonuclease P (RNase P) mediated RNA cleavage is a potential gene silencing strategy.
- The Ets-2 proto-oncogene plays a critical role in cancer and immune system gene expression.
Purpose of the Study:
- To construct a functional RNase P-based ribozyme (M1GS303) specifically designed to target and cleave Ets-2 mRNA.
- To evaluate the efficacy of M1GS303 in silencing Ets-2 expression in both bacterial and mammalian systems.
Main Methods:
- Identification of accessible Ets-2 mRNA sites using footprinting analysis.
- Construction of the M1GS303 ribozyme via molecular cloning.
- Quantification of ribozyme activity and Ets-2 mRNA levels using RT-PCR in E. coli and human cell lines, with and without spiramycin.
- Assessment of endogenous Ets-2 silencing by RT-PCR, Western blot, and immunofluorescence.
Main Results:
- M1GS303 significantly reduced Ets-2 mRNA levels by 93% in E. coli and rapidly downregulated Ets-2 in HEK293 and Jurkat cells.
- Spiramycin enhanced M1GS303 activity, leading to faster Ets-2 mRNA cleavage.
- In Jurkat cells, Ets-2 downregulation upregulated IL-2, IL-4, and IFN-α cytokine gene expression, while IL-10 remained unaffected.
Conclusions:
- The M1GS303 ribozyme demonstrates effective Ets-2 mRNA cleavage in diverse cell types, with spiramycin as a potentiator.
- Silencing Ets-2 in T-cells leads to the upregulation of specific cytokine genes, highlighting its regulatory role.
- M1GS technology presents a promising alternative to conventional gene-interference therapies for various pathological conditions.
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