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Fusion genes: A promising tool combating against cancer
Xiaofeng Dai1, Rutaganda Theobard1, Hongye Cheng1
1School of Biotechnology, Jiangnan University, Wuxi 214122, China; National Engineering Laboratory for Cereal Fermentation Technology, Jiangnan University, Wuxi 214122, China; The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, China.
Abstract:
The driving roles of fusion genes during tumorigenesis have been recognized for decades, with efficacies demonstrated in clinical diagnosis and targeted therapy. With advances in sequencing technologies and computational biology, a surge in the identification of fusion genes has been witnessed during the past decade. The discovery and presence of splicing based fusions in normal tissues have challenged our canonical conceptions on fusion genes and offered us novel medical opportunities. The specificity of fusion genes to neoplastic tissues and their diverse functionalities during carcinogenesis foster them as promising tools in the battle against cancer. It is time to re-visit and comb through our cutting-edge knowledge on fusion genes to accelerate clinical translation of these internal markers. Urged as such, we are encouraged to categorize fusion events according to mechanisms leading to their generation, oncological consequences and clinical implications, offer insights on fusion occurrence across tumors from the system level, highlight feasible practices in fusion-related pharmaceutical development, and identify understudied yet important niches that may lead future research trend in this field.
Insights
Fusion genes are key drivers in cancer development, offering new diagnostic and therapeutic opportunities. Recent discoveries in normal tissues highlight their complex roles, necessitating a re-evaluation for clinical applications.
Area of Science:
- Genomics
- Cancer Biology
- Bioinformatics
Background:
- Fusion genes have long been recognized for their critical roles in tumorigenesis.
- Advances in sequencing and computational biology have accelerated the identification of fusion genes.
- The discovery of splicing-based fusions in normal tissues challenges traditional understanding and presents new medical avenues.
Purpose of the Study:
- To re-evaluate current knowledge on fusion genes for accelerated clinical translation.
- To categorize fusion events by generation mechanisms, oncological consequences, and clinical implications.
- To provide system-level insights into fusion gene occurrence across tumors and guide future research.
Main Methods:
- Review and synthesis of existing literature on fusion genes.
- Categorization of fusion events based on mechanistic, oncological, and clinical criteria.
- System-level analysis of fusion gene occurrence across diverse tumor types.
Main Results:
- Fusion genes are specific to neoplastic tissues and play diverse roles in carcinogenesis.
- Understanding fusion gene mechanisms and implications is crucial for targeted cancer therapy.
- The presence of fusion genes in normal tissues opens novel diagnostic and therapeutic possibilities.
Conclusions:
- Fusion genes represent promising biomarkers and therapeutic targets in oncology.
- A comprehensive understanding of fusion gene biology is essential for advancing cancer treatment.
- Further research into understudied fusion gene niches may uncover future therapeutic strategies.
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