Related Experiment Video
Updated: Feb 15, 2026

Colorectal Cancer Cell Surface Protein Profiling Using an Antibody Microarray and Fluorescence Multiplexing
Published on: September 25, 2011
Targeting RAS-driven human cancer cells with antibodies to upregulated and essential cell-surface proteins
Alexander J Martinko1,2, Charles Truillet3, Olivier Julien1
1Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, United States.
Abstract:
While there have been tremendous efforts to target oncogenic RAS signaling from inside the cell, little effort has focused on the cell-surface. Here, we used quantitative surface proteomics to reveal a signature of proteins that are upregulated on cells transformed with KRASG12V, and driven by MAPK pathway signaling. We next generated a toolkit of recombinant antibodies to seven of these RAS-induced proteins. We found that five of these proteins are broadly distributed on cancer cell lines harboring RAS mutations. In parallel, a cell-surface CRISPRi screen identified integrin and Wnt signaling proteins as critical to RAS-transformed cells. We show that antibodies targeting CDCP1, a protein common to our proteomics and CRISPRi datasets, can be leveraged to deliver cytotoxic and immunotherapeutic payloads to RAS-transformed cancer cells and report for RAS signaling status in vivo. Taken together, this work presents a technological platform for attacking RAS from outside the cell.
Insights
Researchers developed a new method to target cancer-driving RAS proteins from outside the cell. Antibodies targeting CDCP1 can deliver cancer therapies and report on RAS signaling status in vivo.
Area of Science:
- Oncology
- Molecular Biology
- Immunology
Background:
- Targeting oncogenic RAS signaling has primarily focused on intracellular mechanisms.
- The cell surface of RAS-transformed cells remains an under-explored area for therapeutic intervention.
Purpose of the Study:
- To identify cell-surface protein targets upregulated by oncogenic RAS signaling.
- To develop a platform for targeting RAS-transformed cancer cells from the cell exterior.
Main Methods:
- Quantitative surface proteomics to identify RAS-induced surface proteins.
- Generation of recombinant antibodies against identified targets.
- Cell-surface CRISPRi screening to identify critical signaling pathways.
- In vivo validation of antibody-mediated payload delivery and RAS signaling reporting.
Main Results:
- A signature of proteins upregulated on KRASG12V-transformed cells was identified.
- Five of seven tested RAS-induced surface proteins were broadly distributed on RAS-mutated cancer cell lines.
- CDCP1 was identified as a common target through proteomics and CRISPRi screening.
- Antibodies targeting CDCP1 demonstrated efficacy in delivering cytotoxic and immunotherapeutic payloads and reporting RAS signaling status in vivo.
Conclusions:
- A technological platform for targeting RAS signaling from the cell surface has been established.
- CDCP1 is a promising target for antibody-based therapies against RAS-transformed cancers.
- This approach offers a novel strategy for cancer treatment and diagnostics.
Related Concept Videos
Compounds Essential to Human Function
Inorganic Compounds Essential to Human Functioning
Inorganic compounds essential to human functioning include water, salts, acids, and bases. These compounds are inorganic, i.e., they do not have a carbon-hydrogen bond. Water...
Cell-surface Signaling
The Ras Gene
Ras is a...
Targeted Cancer Therapies
There are several types of targeted therapies against...
Small GTPases - Ras and Rho
Three regulatory proteins control their activity:
Target Cell Response to Hormones
Notably, the cellular response can be regulated by altering the number of receptors expressed in the cell. For example, prolonged exposure to elevated hormone levels results in a gradual decline or down-regulation in the number of receptors for that specific hormone on the cell surface. Conversely, in response to low hormone levels, cells may use up-regulation, producing an...

