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Updated: Feb 15, 2026

The Use of Chemostats in Microbial Systems Biology
Published on: October 14, 2013
6,7-dimethoxy-coumarin as a probe of hydration dynamics in biologically relevant systems
Avisek Ghose1, Mariana Amaro1, Petr Kovaricek2
1Department of Biophysical Chemistry, J. Heyrovský Institute of Physical Chemistry of the CAS, v. v. i., Dolejškova 2155/3, 182 23 Prague 8, Czechia.
Abstract:
Coumarin derivatives are well known fluorescence reporters for investigating biological systems due to their strong micro-environment sensitivity. Despite having wide range of environment sensitive fluorescence probes, the potential of 6,7-dimethoxy-coumarin has not been studied extensively so far. With a perspective of its use in protein studies, namely using the unnatural amino acid technology or as a substrate for hydrolase enzymes, we study acetyloxymethyl-6,7-dimethoxycoumarin (Ac-DMC). We investigate the photophysics and hydration dynamics of this dye in aerosol-OT (AOT) reverse micelles at various water contents using the time dependent fluorescence shift (TDFS) method. The TDFS response in AOT reverse micelles from water/surfactant ratio of 0 to 20 confirms its sensitivity towards the hydration and mobility of its microenvironment. Moreover, we show that the fluorophore can be efficiently quenched by halide ions. Hence, we conclude that the 6,7-dimethoxy-methylcoumarin fluorophore is useful for studying hydration parameters in biologically relevant systems.
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