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Published on: December 5, 2016
Lethal mutagenesis of an RNA plant virus via lethal defection
Luis Díaz-Martínez1, Isabel Brichette-Mieg1, Axier Pineño-Ramos1
1Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Consejo Superior de Investigaciones Científicas-Universidad de Málaga, Área de Genética, Facultad de Ciencias, Campus de Teatinos, 29071, Málaga, Spain.
Abstract:
Lethal mutagenesis is an antiviral therapy that relies on increasing the viral mutation rate with mutagenic nucleoside or base analogues. Currently, the molecular mechanisms that lead to virus extinction through enhanced mutagenesis are not fully understood. Increasing experimental evidence supports the lethal defection model of lethal mutagenesis of RNA viruses, where replication-competent-defectors drive infective virus towards extinction. Here, we address lethal mutagenesis in vivo using 5-fluorouracil (5-FU) during the establishment of tobacco mosaic virus (TMV) systemic infections in N. tabacum. The results show that 5-FU decreased the infectivity of TMV without affecting its viral load. Analysis of molecular clones spanning two genomic regions showed an increase of the FU-related base transitions A → G and U → C. Although the mutation frequency or the number of mutations per molecule did not increase, the complexity of the mutant spectra and the distribution of the mutations were altered. Overall, our results suggest that 5-FU antiviral effect on TMV is associated with the perturbation of the mutation-selection balance in the genomic region of the RNA-dependent RNA polymerase (RdRp). Our work supports the lethal defection model for lethal mutagenesis in vivo in a plant RNA virus and opens the way to study lethal mutagens in plant-virus systems.
Insights
Lethal mutagenesis using 5-fluorouracil (5-FU) reduced tobacco mosaic virus (TMV) infectivity in plants. This antiviral strategy perturbs the mutation-selection balance, supporting the lethal defection model for RNA viruses.
Area of Science:
- Virology
- Molecular Biology
- Plant Pathology
Background:
- Lethal mutagenesis is an antiviral strategy that increases viral mutation rates using mutagenic agents.
- The precise molecular mechanisms driving virus extinction via lethal mutagenesis remain incompletely understood.
- The lethal defection model proposes that replication-competent mutants drive virus populations toward extinction.
Purpose of the Study:
- To investigate the in vivo effects of lethal mutagenesis on tobacco mosaic virus (TMV) using 5-fluorouracil (5-FU).
- To elucidate the molecular mechanisms underlying 5-FU's antiviral activity against TMV in Nicotiana tabacum.
Main Methods:
- Systemic TMV infections were established in N. tabacum plants.
- Plants were treated with 5-FU, a mutagenic nucleobase analogue.
- Viral infectivity, viral load, and mutation profiles in specific genomic regions were analyzed.
Main Results:
- 5-FU treatment decreased TMV infectivity without altering viral load.
- Specific base transitions (A→G and U→C) were increased by 5-FU.
- While mutation frequency per molecule did not increase, the complexity and distribution of mutations were altered, particularly in the RNA-dependent RNA polymerase (RdRp) gene.
Conclusions:
- 5-FU exhibits an antiviral effect on TMV by disrupting the mutation-selection balance.
- These findings support the lethal defection model for lethal mutagenesis in plant RNA viruses.
- This study provides a foundation for exploring lethal mutagens in plant-virus systems.
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