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Updated: Feb 15, 2026

An Analytical Tool that Quantifies Cellular Morphology Changes from Three-dimensional Fluorescence Images
Published on: August 31, 2012
disLocate: tools to rapidly quantify local intermolecular structure to assess two-dimensional order in self-assembled
Matt Bumstead1, Kunyu Liang2, Gregory Hanta2
1McMaster University, Department of Engineering Physics, Hamilton, L8S 4L7, Canada. bumstema@mcmaster.ca.
This study introduces disLocate, a Mathematica package for quantifying spatial structure in 2D dispersions. It provides tools to analyze translational, orientational, and entropic order, aiding in the analysis of imperfectly ordered systems.
Area of Science:
- Photonics, optoelectronics, nanotechnology, biology, and biomedicine.
- Analysis of spatial structure in two-dimensional dispersions.
- Quantification of order and disorder in self-assembled and living systems.
Background:
- Accurate classification of order is crucial in various scientific fields where systems are ordered but not perfectly.
- Reproducing specific patterns experimentally can be challenging due to visual similarity between ordered and disordered outcomes.
- Robust comparisons of similar samples, especially with limited data, require precise analysis tools.
Purpose of the Study:
- To introduce disLocate, a numerical Mathematica package designed to quantify the spatial structure of 2D dispersions.
- To provide researchers with a suite of tools for rapid and accurate analysis of order and disorder.
- To enable extraction of variation and confidence ranges from finite data sets, facilitating robust conclusions.
Main Methods:
- Development of a Mathematica package named disLocate.
- Implementation of tools to quantify translational, orientational, and entropic order.
- Inclusion of various structure metrics to assess local variations in disorder within single images.
Main Results:
- disLocate offers a comprehensive set of tools for analyzing spatial structure.
- The package allows for simultaneous extraction of multiple parameters, enabling rapid and robust analysis.
- Researchers can quantify local disorder and determine confidence ranges within finite data sets.
Conclusions:
- disLocate facilitates accurate quantification of spatial structure in 2D dispersions.
- The package aids in understanding the quality and type of order present in complex systems.
- By quantifying experimental trends, disLocate can guide the engineering of novel self-assembly methods.
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