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Causality analysis of leading singular value decomposition modes identifies rotor as the dominant driving normal mode
Yaacov Biton1, Avinoam Rabinovitch1, Doron Braunstein2
1Physics Department, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel.
Insights
Singular Value Decomposition (SVD) and Wiener-Granger causality analysis (WGCA) reveal that cardiac rotors can be the dominant driving force behind fibrillation, even in complex cases. These methods confirm rotors preferentially influence fibrillatory activity.
Area of Science:
- Cardiovascular Physiology
- Computational Biology
- Biophysics
Background:
- Cardiac fibrillation poses a significant clinical and societal challenge.
- The role of rotors in driving fibrillation is often obscured by complex wave propagation patterns.
Purpose of the Study:
- To investigate the dominant role of rotors in cardiac fibrillation using advanced analytical techniques.
- To determine if combining Singular Value Decomposition (SVD) with Wiener-Granger causality analysis (WGCA) can identify rotor dominance in complex fibrillation.
Main Methods:
- Optical mapping experiments were performed on genetically modified neonatal rat cardiomyocyte monolayers.
- Singular Value Decomposition (SVD) was used to hierarchically rank activation patterns.
- Wiener-Granger causality analysis (WGCA) was applied to assess directional influence between identified modes.
Main Results:
- SVD analysis identified rotor activity as primary modes in the IKr-overexpressing region and fibrillatory activity as secondary modes elsewhere.
- Initial WGCA showed bidirectional influence between rotor and fibrillatory modes.
- Subsequent WGCA, focusing on distinct rotor and fibrillatory domains, revealed preferential influence from rotor modes to fibrillatory modes.
Conclusions:
- SVD analysis demonstrates that rotors can represent the dominant modes in an experimental model of cardiac fibrillation.
- WGCA applied to rotor domains confirms their preferential driving influence on fibrillatory modes, even amidst complexity.
Abstract:
Cardiac fibrillation is a major clinical and societal burden. Rotors may drive fibrillation in many cases, but their role and patterns are often masked by complex propagation. We used Singular Value Decomposition (SVD), which ranks patterns of activation hierarchically, together with Wiener-Granger causality analysis (WGCA), which analyses direction of information among observations, to investigate the role of rotors in cardiac fibrillation. We hypothesized that combining SVD analysis with WGCA should reveal whether rotor activity is the dominant driving force of fibrillation even in cases of high complexity. Optical mapping experiments were conducted in neonatal rat cardiomyocyte monolayers (diameter, 35 mm), which were genetically modified to overexpress the delayed rectifier K+ channel IKr only in one half of the monolayer. Such monolayers have been shown previously to sustain fast rotors confined to the IKr overexpressing half and driving fibrillatory-like activity in the other half. SVD analysis of the optical mapping movies revealed a hierarchical pattern in which the primary modes corresponded to rotor activity in the IKr overexpressing region and the secondary modes corresponded to fibrillatory activity elsewhere. We then applied WGCA to evaluate the directionality of influence between modes in the entire monolayer using clear and noisy movies of activity. We demonstrated that the rotor modes influence the secondary fibrillatory modes, but influence was detected also in the opposite direction. To more specifically delineate the role of the rotor in fibrillation, we decomposed separately the respective SVD modes of the rotor and fibrillatory domains. In this case, WGCA yielded more information from the rotor to the fibrillatory domains than in the opposite direction. In conclusion, SVD analysis reveals that rotors can be the dominant modes of an experimental model of fibrillation. Wiener-Granger causality on modes of the rotor domains confirms their preferential driving influence on fibrillatory modes.
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