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Published on: September 7, 2018
Graph Theory and Ion and Molecular Aggregation in Aqueous Solutions
Jun-Ho Choi1,2,3, Hochan Lee1,2, Hyung Ran Choi1,2
1Center for Molecular Spectroscopy and Dynamics, Institute for Basic Science, Seoul 02841, Republic of Korea.
Ions and molecules form large aggregates in concentrated solutions, influencing water structure. Graph theory reveals percolating behavior in these aggregates, mirroring water network changes.
Area of Science:
- Molecular and Cellular Biology
- Physical Chemistry
- Biophysics
Background:
- Dissolved ions and molecules significantly impact biomolecular reactions, stability, and function.
- Understanding the effects of solutes (ions, osmolytes, sugars) on water structure and protein dynamics remains incomplete.
Purpose of the Study:
- To investigate the aggregation behavior of ions and molecules in concentrated aqueous solutions.
- To elucidate the relationship between solute aggregation and water hydrogen-bonding networks.
- To explore the application of graph theory in characterizing aggregate morphology and dynamics.
Main Methods:
- Time-resolved vibrational spectroscopy
- Molecular dynamics (MD) simulations
- Graph-theoretical analysis of MD trajectories
Main Results:
- Ions and solute molecules self-assemble into large, polydisperse aggregates.
- These aggregates significantly alter local and long-range water hydrogen-bonding structures.
- Graph theory effectively characterizes aggregate morphology, revealing percolating behavior with increasing solute concentration.
- An isomorphic relationship exists between percolation transitions of solute aggregates and water hydrogen-bonding networks.
Conclusions:
- The combination of graph theory and MD simulations provides deep insights into solute aggregation and its impact on water structure.
- This approach enhances understanding of dissolution, solute self-aggregation, and water dynamics in complex solutions.
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