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Updated: Feb 14, 2026

Isolation and Identification of Bacterial Strains from Skin of Terrestrial Amphibians
Published on: June 17, 2025
Host-associated bacterial community succession during amphibian development
Tiffany L Prest1,2, Abigail K Kimball1,3, Jordan G Kueneman1,4
1Department of Ecology and Evolutionary Biology, University of Colorado at Boulder, Boulder, CO, USA.
Amphibian skin symbionts change as they develop, shifting from generalist to specialized bacteria. These microbial communities assemble predictably, influenced by developmental milestones like hatching and metamorphosis.
Area of Science:
- Microbiology
- Developmental Biology
- Ecology
Background:
- Amphibian skin hosts symbiotic microbial communities.
- The acquisition and sources of these symbionts throughout amphibian development are poorly understood.
- Understanding microbial community assembly is crucial for host health.
Purpose of the Study:
- To investigate the sources of skin bacterial symbionts in boreal toads (Anaxyrus boreas) across different life stages.
- To determine how microbial communities change during amphibian development.
- To elucidate the factors driving bacterial community assembly on amphibian skin.
Main Methods:
- 16S rRNA marker gene profiling was used to analyze bacterial communities.
- SourceTracker analysis was employed to identify microbial symbiont sources.
- Bacterial communities from toad life stages (eggs, tadpoles, subadults, adults) and environmental samples (water, sediment, soil) were compared.
Main Results:
- Primary environmental sources of symbionts remained constant, but secondary sources shifted significantly with toad development.
- Boreal toad skin bacterial communities exhibited predictable changes across development, with major shifts occurring at egg hatching and metamorphosis.
- Bacterial communities assembled into distinct stable states post-developmental disturbances.
- A successional pattern was observed, with fast-growing generalist bacteria initially dominating, followed by slow-growing specialist bacteria.
Conclusions:
- Amphibian skin bacterial community assembly is closely linked to host development.
- Developmental stages and disturbances significantly shape host-associated microbial communities.
- Successional dynamics, similar to free-living communities, occur in amphibian skin microbiota.
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