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Updated: Feb 14, 2026

Generating CRISPR/Cas9 Mediated Monoallelic Deletions to Study Enhancer Function in Mouse Embryonic Stem Cells
Published on: April 2, 2016
Generation of human embryonic stem cell line with heterozygous RB1 deletion by CRIPSR/Cas9 nickase
1Department of Integrative Biology and Pharmacology, McGovern Medical School, The University of Texas Health Science Center at Houston, Houston, TX 77030, USA; Department of Musculoskeletal Oncology, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou 510080, China.
Abstract:
The Retinoblastoma 1 (RB1) tumor suppressor, a member of the Retinoblastoma gene family, functions as a pocket protein for the functional binding of E2F transcription factors. About 1/3 of retinoblastoma patients harbor a germline RB1 mutation or deletion, leading to the development of retinoblastoma. Here, we demonstrate generation of a heterozygous deletion of the RB1 gene in the H1 human embryonic stem cell line using CRISPR/Cas9 nickase genome editing. The RB1 heterozygous knockout H1 cell line shows a normal karyotype, maintains a pluripotent state, and is capable of differentiation to the three germline layers.
Insights
Researchers created a Retinoblastoma 1 (RB1) heterozygous knockout human embryonic stem cell line. This cell line, crucial for studying retinoblastoma, maintains pluripotency and differentiates normally.
Area of Science:
- Genetics
- Stem Cell Biology
- Cancer Research
Background:
- The Retinoblastoma 1 (RB1) tumor suppressor is vital for cell cycle regulation and is frequently mutated in retinoblastoma.
- Germline mutations or deletions in RB1 are found in approximately one-third of retinoblastoma patients, leading to tumor development.
- Understanding RB1's function is critical for developing therapeutic strategies against retinoblastoma.
Purpose of the Study:
- To generate a heterozygous knockout of the RB1 gene in a human embryonic stem cell line.
- To characterize the resulting cell line for its potential use in retinoblastoma research.
- To validate the application of CRISPR/Cas9 nickase technology for targeted gene editing in pluripotent stem cells.
Main Methods:
- CRISPR/Cas9 nickase genome editing was employed to create a heterozygous deletion of the RB1 gene.
- The H1 human embryonic stem cell line was utilized for gene editing.
- Standard cell culture and molecular biology techniques were used for characterization.
Main Results:
- A heterozygous knockout of the RB1 gene was successfully generated in the H1 cell line.
- The RB1 heterozygous knockout H1 cell line exhibited a normal karyotype.
- The modified cell line maintained its pluripotent state and demonstrated the capacity for differentiation into the three primary germ layers.
Conclusions:
- The generated RB1 heterozygous knockout H1 cell line serves as a valuable preclinical model for studying retinoblastoma.
- CRISPR/Cas9 nickase editing is an effective method for creating targeted gene deletions in human embryonic stem cells.
- This research provides a foundation for further investigation into RB1's role in development and disease.
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