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Predicting outcome of Morris water maze test in vascular dementia mouse model with deep learning
Akinori Higaki1,2, Masaki Mogi3, Jun Iwanami1
1Department of Molecular Cardiovascular Biology and Pharmacology, Ehime University, Graduate School of Medicine, Tohon, Ehime, Japan.
Abstract:
The Morris water maze test (MWM) is one of the most popular and established behavioral tests to evaluate rodents' spatial learning ability. The conventional training period is around 5 days, but there is no clear evidence or guidelines about the appropriate duration. In many cases, the final outcome of the MWM seems predicable from previous data and their trend. So, we assumed that if we can predict the final result with high accuracy, the experimental period could be shortened and the burden on testers reduced. An artificial neural network (ANN) is a useful modeling method for datasets that enables us to obtain an accurate mathematical model. Therefore, we constructed an ANN system to estimate the final outcome in MWM from the previously obtained 4 days of data in both normal mice and vascular dementia model mice. Ten-week-old male C57B1/6 mice (wild type, WT) were subjected to bilateral common carotid artery stenosis (WT-BCAS) or sham-operation (WT-sham). At 6 weeks after surgery, we evaluated their cognitive function with MWM. Mean escape latency was significantly longer in WT-BCAS than in WT-sham. All data were collected and used as training data and test data for the ANN system. We defined a multiple layer perceptron (MLP) as a prediction model using an open source framework for deep learning, Chainer. After a certain number of updates, we compared the predicted values and actual measured values with test data. A significant correlation coefficient was derived form the updated ANN model in both WT-sham and WT-BCAS. Next, we analyzed the predictive capability of human testers with the same datasets. There was no significant difference in the prediction accuracy between human testers and ANN models in both WT-sham and WT-BCAS. In conclusion, deep learning method with ANN could predict the final outcome in MWM from 4 days of data with high predictive accuracy in a vascular dementia model.
Insights
Artificial neural networks (ANN) can accurately predict Morris water maze (MWM) outcomes from four days of data. This deep learning approach reduces MWM testing duration and researcher burden, especially in vascular dementia models.
Area of Science:
- Neuroscience
- Computational Biology
- Behavioral Science
Background:
- The Morris water maze (MWM) is a key test for rodent spatial learning.
- Current MWM protocols lack clear guidelines on optimal training duration.
- Predicting MWM outcomes could shorten experiments and reduce tester workload.
Purpose of the Study:
- To develop an artificial neural network (ANN) system for predicting MWM final outcomes.
- To assess if ANN can predict MWM results using only 4 days of data.
- To compare ANN predictive accuracy with human testers.
Main Methods:
- An ANN (multiple layer perceptron) was trained using 4 days of MWM data from wild-type (WT) and vascular dementia model (WT-BCAS) mice.
- The ANN model's predictions were compared against actual MWM results.
- Human testers' predictions using the same data were analyzed for comparison.
Main Results:
- The ANN system achieved high predictive accuracy, showing significant correlation coefficients for both WT-sham and WT-BCAS groups.
- No significant difference was found between the predictive accuracy of ANN models and human testers.
- Vascular dementia model mice (WT-BCAS) exhibited significantly longer escape latencies.
Conclusions:
- Deep learning using ANNs can accurately predict MWM outcomes from limited data (4 days).
- This approach offers a potential method to shorten MWM testing periods.
- ANNs provide a reliable alternative for predicting MWM results, comparable to human assessment.
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