CONCORD biomarker prediction for novel drug introduction to different cancer types

Youngchul Kim1, Patrick M Dillon2, Taesung Park3

  • 1Department of Biostatistics and Bioinformatics, Moffitt Cancer Center, Tampa, FL, USA.

Oncotarget
|February 9, 2018
PubMed

Insights

A new method called CONCORD predicts cancer drug effectiveness across different cancer types. It identifies shared biomarkers, improving treatment predictions for novel therapies.

Area of Science:

  • Oncology
  • Biomarker Discovery
  • Translational Medicine

Background:

  • Many cancer drugs are effective across multiple cancer types, but predicting efficacy in new cancers is challenging.
  • Companion biomarkers identified in one cancer may not accurately predict response in others.
  • Small patient populations often benefit from therapies, necessitating predictive tools for broader application.

Purpose of the Study:

  • To develop a novel computational technique for predicting anti-cancer drug responses across different cancer types.
  • To overcome limitations of traditional biomarker-based prediction methods.
  • To identify concordantly co-expressed biomarkers for cross-cancer drug response prediction.

Main Methods:

  • Developed a concordant expression biomarker-based technique (CONCORD).
  • CONCORD identifies co-expressed biomarkers that are consistently found across different cancer types.
  • Applied CONCORD to evaluate drug responses for standard chemotherapeutic and targeted agents.

Main Results:

  • CONCORD accurately predicted drug effectiveness in new cancer types.
  • The technique demonstrated reliable prediction of therapeutic response in patients.
  • Validated the approach using multiple chemotherapeutic and targeted agents.

Conclusions:

  • CONCORD offers a robust method for predicting cross-cancer drug efficacy.
  • This approach enhances the potential for repurposing cancer therapies.
  • CONCORD facilitates more accurate patient stratification for targeted cancer treatments.

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