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Understanding Mucor circinelloides pathogenesis by comparative genomics and phenotypical studies
Loida López-Fernández1, Marta Sanchis1, Patricia Navarro-Rodríguez1
1a Unitat de Microbiologia, Facultat de Medicina i Ciències de la Salut, Universitat Rovira i Virgili and Institut d'Investigació Sanitària Pere Virgili (IISPV) , Reus , Spain.
Abstract:
The increasing number of infections by species of Mucorales and their high mortality constitute an important concern for public health. This study aims to decipher the genetic basis of Mucor circinelloides pathogenicity, which displays virulence in a strain dependent manner. Assuming that genetic differences between strains may be linked to different pathotypes, we have conducted a study to explore genes responsible for virulence in M. circinelloides by whole genome sequencing of the avirulent strain NRRL3631 and comparison with the virulent strain CBS277.49. This genome analysis revealed 773 truncated, discontiguous and absent genes in the NRRL3631 strain. We also examined phenotypic traits resulting in reduced heat stress tolerance, chitosan content and lower susceptibility to toxic compounds (calcofluor white and sodium dodecyl sulphate) in the virulent strain, suggesting the influence of cell wall on pathogenesis. Based on these results, we focused on studying extracellular protein-coding genes by gene deletion and further pathotype characterization of mutants in murine models of pulmonary and systemic infection. Deletion of gene ID112092, which codes for a hypothetical extracellular protein of unknown function, resulted in significant reduction of virulence. Although pathogenesis is a multifactorial process, these findings highlight the crucial role of surface and secreted proteins in M. circinelloides virulence and should promote further studies of other differential genes.
Insights
Mucor circinelloides infections are a growing public health threat. Genetic analysis identified a key extracellular protein essential for virulence, offering new targets for combating this fungus.
Area of Science:
- Mycology
- Infectious Diseases
- Genomics
Background:
- Mucorales infections pose significant public health risks due to high mortality.
- Mucor circinelloides exhibits strain-dependent virulence, suggesting underlying genetic variations.
- Understanding the genetic basis of virulence is crucial for developing effective treatments.
Purpose of the Study:
- To decipher the genetic underpinnings of Mucor circinelloides pathogenicity.
- To identify specific genes contributing to virulence through comparative genomics.
- To explore the role of cell wall components and extracellular proteins in fungal pathogenesis.
Main Methods:
- Whole genome sequencing of an avirulent (NRRL3631) and a virulent (CBS277.49) M. circinelloides strain.
- Comparative genomic analysis to identify genetic differences, including gene truncations and absences.
- Phenotypic characterization focusing on heat stress, cell wall composition, and susceptibility to toxic compounds.
- Gene deletion studies of extracellular protein-coding genes and virulence assessment in murine infection models.
Main Results:
- Genome comparison revealed 773 genetic differences in the avirulent strain.
- The virulent strain showed altered cell wall properties and increased tolerance to certain compounds.
- Deletion of the hypothetical extracellular protein-coding gene ID112092 significantly reduced M. circinelloides virulence.
- Extracellular and surface proteins play a critical role in M. circinelloides pathogenesis.
Conclusions:
- Genetic variations, particularly in genes encoding extracellular proteins, are critical for M. circinelloides virulence.
- The gene ID112092 is a significant contributor to the fungus's pathogenicity.
- Targeting surface and secreted proteins represents a promising strategy for controlling Mucorales infections.
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