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Published on: August 8, 2022
Genetic investigation of 93 families with microphthalmia or posterior microphthalmos
N Patel1, A O Khan1,2, S Alsahli1
1Department of Genetics, King Faisal Specialist Hospital and Research Center, Riyadh 11211, Saudi Arabia.
Abstract:
Microphthalmia is a developmental eye defect that is highly variable in severity and in its potential for systemic association. Despite the discovery of many disease genes in microphthalmia, at least 50% of patients remain undiagnosed genetically. Here, we describe a cohort of 147 patients (93 families) from our highly consanguineous population with various forms of microphthalmia (including the distinct entity of posterior microphthalmos) that were investigated using a next-generation sequencing multi-gene panel (i-panel) as well as whole exome sequencing and molecular karyotyping. A potentially causal mutation was identified in the majority of the cohort with microphthalmia (61%) and posterior microphthalmos (82%). The identified mutations (55 point mutations, 15 of which are novel) spanned 24 known disease genes, some of which have not or only very rarely been linked to microphthalmia (PAX6, SLC18A2, DSC3 and CNKSR1). Our study has also identified interesting candidate variants in 2 genes that have not been linked to human diseases (MYO10 and ZNF219), which we present here as novel candidates for microphthalmia. In addition to revealing novel phenotypic aspects of microphthalmia, this study expands its allelic and locus heterogeneity and highlights the need for expanded testing of patients with this condition.
Insights
Genetic testing using next-generation sequencing identified the cause of microphthalmia in over 60% of patients. This study expands the understanding of genetic mutations linked to this developmental eye defect.
Area of Science:
- Ophthalmology
- Medical Genetics
- Developmental Biology
Background:
- Microphthalmia is a variable developmental eye defect with frequent, yet often undiagnosed, genetic causes.
- Existing genetic diagnostics leave over 50% of microphthalmia patients without a molecular diagnosis.
Purpose of the Study:
- To genetically investigate a cohort of 147 patients with microphthalmia and posterior microphthalmos.
- To identify novel disease genes and expand the understanding of genetic heterogeneity in microphthalmia.
Main Methods:
- Next-generation sequencing multi-gene panel (i-panel)
- Whole exome sequencing
- Molecular karyotyping
Main Results:
- A causal mutation was identified in 61% of microphthalmia and 82% of posterior microphthalmos patients.
- Mutations were found in 24 known genes, including PAX6, SLC18A2, DSC3, and CNKSR1, some rarely linked to microphthalmia.
- Novel candidate variants were identified in MYO10 and ZNF219.
Conclusions:
- Next-generation sequencing significantly improves diagnostic yield in microphthalmia.
- The study expands the known genetic spectrum and locus heterogeneity of microphthalmia.
- Expanded genetic testing is crucial for patients with microphthalmia and related disorders.
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