The discrepancy function of NLRC5 isoforms in antiviral and antibacterial immune responses

Lu Cao1, Xiao Man Wu2, Yi Wei Hu2

  • 1State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, Hubei Province 430072, China; University of Chinese Academy of Sciences, Beijing, 100039, China.

Insights

Zebrafish NLRC5 isoforms, zfNLRC5a and zfNLRC5d, regulate innate immunity. zfNLRC5d enhances antiviral defense, while both isoforms impact TLRs, NF-κB signaling, and antibacterial responses.

Area of Science:

  • Immunology
  • Molecular Biology
  • Genetics

Background:

  • NOD-like receptors (NLRs) are crucial for innate immunity.
  • NLRC5 regulates immunity and MHC class I expression.
  • NLRC5 alternative splicing is known in humans and zebrafish, but isoform functions are unclear.

Purpose of the Study:

  • To functionally characterize zebrafish NLRC5 (zfnlrc5) splicing isoforms, zfNLRC5a and zfNLRC5d.
  • To investigate the role of these isoforms in innate immune responses against viral and bacterial infections.

Main Methods:

  • Generated and characterized zfNLRC5a and zfNLRC5d isoforms via exon skipping.
  • Utilized fluorescence microscopy for subcellular localization.
  • Assessed isoform expression upon bacterial and viral challenge.
  • Performed in vitro and in vivo studies to evaluate antiviral and antibacterial activities.
  • Analyzed transcriptional regulation of Toll-like receptors (TLRs) and NF-κB signaling pathways.

Main Results:

  • zfNLRC5a and zfNLRC5d are generated by alternative splicing in the LRR region.
  • Isoforms are expressed throughout the cell, including the nucleus, and are inducible by infection.
  • zfNLRC5d overexpression conferred protection against viral infection (SVCV), while zfNLRC5a had no significant effect.
  • Both isoforms, but not full-length zfNLRC5, modulated TLRs and NF-κB signaling.
  • Overexpression of zfNLRC5 isoforms negatively regulated antibacterial immunity by decreasing nfkbiaa (IκBα) expression.

Conclusions:

  • This study provides the first functional characterization of NLRC5 isoforms in zebrafish.
  • zfNLRC5d plays a protective role in antiviral immunity.
  • NLRC5 isoforms are involved in both antiviral and antibacterial innate immune responses, influencing TLR and NF-κB signaling pathways.

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