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CYP3A4 mutation causes vitamin D-dependent rickets type 3
Jeffrey D Roizen1, Dong Li2, Lauren O'Lear1
1Division of Endocrinology and Diabetes and.
Abstract:
Genetic forms of vitamin D-dependent rickets (VDDRs) are due to mutations impairing activation of vitamin D or decreasing vitamin D receptor responsiveness. Here we describe two unrelated patients with early-onset rickets, reduced serum levels of the vitamin D metabolites 25-hydroxyvitamin D and 1,25-dihydroxyvitamin D, and deficient responsiveness to parent and activated forms of vitamin D. Neither patient had a mutation in any genes known to cause VDDR; however, using whole exome sequencing analysis, we identified a recurrent de novo missense mutation, c.902T>C (p.I301T), in CYP3A4 in both subjects that alters the conformation of substrate recognition site 4 (SRS-4). In vitro, the mutant CYP3A4 oxidized 1,25-dihydroxyvitamin D with 10-fold greater activity than WT CYP3A4 and 2-fold greater activity than CYP24A1, the principal inactivator of vitamin D metabolites. As CYP3A4 mutations have not previously been linked to rickets, these findings provide insight into vitamin D metabolism and demonstrate that accelerated inactivation of vitamin D metabolites represents a mechanism for vitamin D deficiency.
Insights
Genetic mutations in CYP3A4 cause severe rickets by accelerating vitamin D inactivation. This discovery reveals a new mechanism for vitamin D deficiency, impacting children
Area of Science:
- Endocrinology
- Genetics
- Biochemistry
Background:
- Genetic forms of vitamin D-dependent rickets (VDDRs) stem from impaired vitamin D activation or receptor function.
- Existing VDDR genetic causes do not explain all cases of early-onset rickets.
Purpose of the Study:
- To identify the genetic cause in two unrelated patients with early-onset rickets and vitamin D deficiency unresponsive to treatment.
- To investigate a novel mutation in CYP3A4 as a potential cause of VDDR.
Main Methods:
- Whole exome sequencing was used to identify genetic mutations in affected patients.
- In vitro assays were performed to assess the enzymatic activity of the identified mutant CYP3A4 enzyme on vitamin D metabolites.
Main Results:
- Two patients with early-onset rickets were found to have reduced serum levels of 25-hydroxyvitamin D and 1,25-dihydroxyvitamin D.
- A recurrent de novo missense mutation (c.902T>C, p.I301T) in CYP3A4 was identified in both patients.
- The mutant CYP3A4 exhibited significantly increased activity in inactivating 1,25-dihydroxyvitamin D compared to wild-type CYP3A4 and CYP24A1.
Conclusions:
- Accelerated inactivation of vitamin D metabolites by a mutant CYP3A4 enzyme is a newly identified mechanism for vitamin D deficiency rickets.
- Mutations in CYP3A4 should be considered in the differential diagnosis of early-onset rickets.
- This finding expands our understanding of vitamin D metabolism and its regulation.
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