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Evaluating In Vitro DNA Damage Using Comet Assay
Published on: October 11, 2017
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DNA damage as a consequence of NLR activation.
Eleazar Rodriguez1, Jonathan Chevalier1, Hassan El Ghoul1
1Department of Biology, University of Copenhagen. Copenhagen, Denmark.
Plos Genetics
|February 21, 2018
Summary
Plant immune responses can cause DNA damage, but this is prevented by blocking cell death triggered by Nucleotide-binding, Leucine-rich-repeat immune Receptors (NLRs). This finding challenges SNI1
Area of Science:
- Plant immunity
- Molecular genetics
- Genomics
Background:
- DNA damage is an intrinsic component of plant immune responses.
- Immune responses aim to maintain host genome integrity.
- SNI1 is a negative regulator of systemic acquired resistance (SAR) and controls DNA damage.
Purpose of the Study:
- Investigate the link between plant immunity, cell death, and DNA damage.
- Determine the role of Nucleotide-binding, Leucine-rich-repeat immune Receptors (NLRs) in immunity-related DNA damage.
- Clarify the function of SNI1 in plant immunity and DNA damage.
Main Methods:
- Genetic analysis of plant mutants (sni1, eds1, camta3, pub13, vad1, dnd1).
- Investigating cell death and DNA damage phenotypes.
- Studying NLR signaling pathways and effector-triggered immunity.
- Analyzing DNA damage repair (DDR) gene expression.
Main Results:
- Immunity-related DNA damage is abrogated by preventing cell death triggered by NLRs.
- Cell death and DNA damage in sni1 mutants are prevented by eds1 mutations.
- DNA damage in camta3 mutants is EDS1-dependent and NLR-dependent.
- Extensive DNA damage occurs when NLRs are triggered by effectors.
- DDR gene expression is downregulated in mutants with cell death lesions.
- SNI1 is not directly involved in SAR or DNA damage accumulation.
Conclusions:
- Plant immune responses involving NLRs can lead to DNA damage through cell death pathways.
- EDS1 and NLR signaling are critical in mediating DNA damage during plant immunity.
- Accumulated DNA in cell death is likely due to cellular dismantling, not sensed damage.
- SNI1's role in DNA damage and SAR requires re-evaluation.
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