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Genotypic Inference of HIV-1 Tropism Using Population-based Sequencing of V3
Published on: December 27, 2010
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IL-10 Promoter -592 Polymorphism may Influence Susceptibility to HIV Infection in South Indian Population
Murugesan Harishankar1, Harini Ravikrishnan1, Akshaya Ravishankar1
1Department of Immunology, National Institute for Research in Tuberculosis, Chennai, India.
Current HIV Research
|February 23, 2018
Summary
Genetic variations in cytokine genes influence disease risk. The IL-10 -592 gene variant (AA genotype) is linked to increased susceptibility to HIV in South India. Further research is recommended.
Area of Science:
- Immunogenetics
- Molecular Epidemiology
Background:
- Genetic factors significantly influence disease susceptibility and protection.
- Cytokine gene polymorphisms can alter cytokine production, impacting disease progression in HIV and TB.
Purpose of the Study:
- To investigate the role of IL-10 -592 (C/A) and TGF-β -509 (C/T) promoter polymorphisms in HIV and TB susceptibility in a South Indian population.
Main Methods:
- Genomic DNA was extracted from healthy controls, pulmonary tuberculosis patients (n=122), and HIV-positive individuals (n=100).
- Genotyping was performed using polymerase chain reaction followed by restriction fragment length polymorphism (PCR-RFLP).
Main Results:
- The IL-10 -592 'A' allele (CA or AA genotypes) was significantly associated with increased HIV susceptibility under a dominant model (OR: 1.88; p=0.030).
- No significant association was found between IL-10 -592 or TGF-β -509 polymorphisms and TB susceptibility.
- TGF-β -509 polymorphism showed no association with either HIV or TB.
- A trend indicated higher HIV risk in females with the IL-10 -592 'AA' genotype.
Conclusions:
- The IL-10 -592 'AA' genotype is associated with HIV susceptibility in the South Indian population.
- Larger sample sizes are required to validate these findings.
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