LncRNA-OIS1 regulates DPP4 activation to modulate senescence induced by RAS
Li Li1, Pieter C van Breugel1, Fabricio Loayza-Puch1
1Division of Oncogenomics, Netherlands Cancer Institute, Plesmanlaan 121, 1066CX Amsterdam, The Netherlands.
Abstract:
Oncogene-induced senescence (OIS), provoked in response to oncogenic activation, is considered an important tumor suppressor mechanism. Long non-coding RNAs (lncRNAs) are transcripts longer than 200 nt without a protein-coding capacity. Functional studies showed that deregulated lncRNA expression promote tumorigenesis and metastasis and that lncRNAs may exhibit tumor-suppressive and oncogenic function. Here, we first identified lncRNAs that were differentially expressed between senescent and non-senescent human fibroblast cells. Using RNA interference, we performed a loss-function screen targeting the differentially expressed lncRNAs, and identified lncRNA-OIS1 (lncRNA#32, AC008063.3 or ENSG00000233397) as a lncRNA required for OIS. Knockdown of lncRNA-OIS1 triggered bypass of senescence, higher proliferation rate, lower abundance of the cell-cycle inhibitor CDKN1A and high expression of cell-cycle-associated genes. Subcellular inspection of lncRNA-OIS1 indicated nuclear and cytosolic localization in both normal culture conditions as well as following oncogene induction. Interestingly, silencing lncRNA-OIS1 diminished the senescent-associated induction of a nearby gene (Dipeptidyl Peptidase 4, DPP4) with established role in tumor suppression. Intriguingly, similar to lncRNA-OIS1, silencing DPP4 caused senescence bypass, and ectopic expression of DPP4 in lncRNA-OIS1 knockdown cells restored the senescent phenotype. Thus, our data indicate that lncRNA-OIS1 links oncogenic induction and senescence with the activation of the tumor suppressor DPP4.
Insights
Oncogene-induced senescence (OIS) is a tumor suppressor mechanism. Researchers identified lncRNA-OIS1 as crucial for OIS, linking it to the tumor suppressor DPP4 activation.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- Oncogene-induced senescence (OIS) acts as a tumor suppressor mechanism.
- Long non-coding RNAs (lncRNAs) are increasingly recognized for their roles in cancer, exhibiting both oncogenic and tumor-suppressive functions.
- Dysregulated lncRNA expression is linked to tumorigenesis and metastasis.
Purpose of the Study:
- To identify long non-coding RNAs (lncRNAs) involved in oncogene-induced senescence (OIS).
- To investigate the function of a specific lncRNA, lncRNA-OIS1, in the OIS pathway.
- To elucidate the relationship between lncRNA-OIS1, OIS, and tumor suppressor genes.
Main Methods:
- Differential expression analysis of lncRNAs in senescent versus non-senescent human fibroblast cells.
- Loss-of-function screen using RNA interference (RNAi) to assess the role of differentially expressed lncRNAs in OIS.
- Subcellular localization studies of lncRNA-OIS1.
- Analysis of the impact of lncRNA-OIS1 manipulation on cell cycle regulators (e.g., CDKN1A) and nearby genes (e.g., DPP4).
Main Results:
- lncRNA-OIS1 was identified as essential for OIS.
- Knockdown of lncRNA-OIS1 led to senescence bypass, increased proliferation, reduced CDKN1A, and elevated cell-cycle gene expression.
- lncRNA-OIS1 localizes to both the nucleus and cytoplasm.
- Silencing lncRNA-OIS1 impaired the induction of the tumor suppressor Dipeptidyl Peptidase 4 (DPP4) during senescence.
- Silencing DPP4 phenocopied lncRNA-OIS1 knockdown, and DPP4 re-expression rescued the senescence defect in lncRNA-OIS1-depleted cells.
Conclusions:
- lncRNA-OIS1 is a critical regulator required for oncogene-induced senescence.
- lncRNA-OIS1 functions by promoting the activation of the tumor suppressor DPP4.
- This study reveals a novel link between lncRNA-OIS1 and DPP4 in the context of OIS and tumor suppression.
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