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Related Concept Videos

Translesion DNA Polymerases02:10

Translesion DNA Polymerases

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Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
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Random Error01:04

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Random or indeterminate errors originate from various uncontrollable variables, such as variations in environmental conditions, instrument imperfections, or the inherent variability of the phenomena being measured. Usually, these errors cannot be predicted, estimated, or characterized because their direction and magnitude often vary in magnitude and direction even during consecutive measurements. As a result, they are difficult to eliminate. However, the aggregate effect of these errors can be...
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Random and Systematic Errors01:20

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Scientists always try their best to record measurements with the utmost accuracy and precision. However, sometimes errors do occur. These errors can be random or systematic. Random errors are observed due to the inconsistency or fluctuation in the measurement process, or variations in the quantity itself that is being measured. Such errors fluctuate from being greater than or less than the true value in repeated measurements. Consider a scientist measuring the length of an earthworm using a...
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Propagation of Uncertainty from Random Error00:59

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An experiment often consists of more than a single step. In this case, measurements at each step give rise to uncertainty. Because the measurements occur in successive steps, the uncertainty in one step necessarily contributes to that in the subsequent step. As we perform statistical analysis on these types of experiments, we must learn to account for the propagation of uncertainty from one step to the next. The propagation of uncertainty depends on the type of arithmetic operation performed on...
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Bacterial RNA Polymerase00:43

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Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
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Eukaryotic RNA Polymerases00:58

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RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
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Related Experiment Video

Updated: Feb 13, 2026

Gene-targeted Random Mutagenesis to Select Heterochromatin-destabilizing Proteasome Mutants in Fission Yeast
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Random Mutagenesis Using Error-Prone DNA Polymerases.

Matteo Forloni, Alex Y Liu, Narendra Wajapeyee

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    This summary is machine-generated.

    Random mutagenesis creates DNA variant libraries for protein evolution studies. This method uses low-fidelity DNA polymerase and selective PCR amplification for unbiased mutation discovery.

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    Area of Science:

    • Molecular Biology
    • Biotechnology
    • Genetics

    Background:

    • Random mutagenesis generates diverse DNA sequence variants.
    • It enables unbiased discovery of novel or beneficial mutations.
    • This technique is particularly valuable for protein evolution studies.

    Purpose of the Study:

    • To describe a protocol for in vitro random mutagenesis.
    • To enable the creation of mutant DNA libraries for research.
    • To facilitate structure-function and directed evolution studies.

    Main Methods:

    • In vitro mutagenic replication using low-fidelity DNA polymerases (e.g., polymerase β, η, ι).
    • Employing primers with non-complementary 5' extensions for mutant strand selection.
    • Selective amplification of mutated sequences via polymerase chain reaction (PCR) with tailored hybridization temperatures.

    Main Results:

    • Successful generation of DNA variant libraries through mutagenic replication.
    • Demonstration of selective amplification of mutated DNA strands.
    • Facilitation of unbiased identification of beneficial mutations.

    Conclusions:

    • The described protocol provides an efficient method for random mutagenesis.
    • This approach supports the unbiased exploration of DNA sequence space.
    • It is a powerful tool for protein engineering and directed evolution.