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Published on: May 12, 2020
Factors influencing readthrough therapy for frequent cystic fibrosis premature termination codons
Iwona Pranke1,2,3, Laure Bidou4,5,3, Natacha Martin6
1INSERM, U1151, Institut Necker Enfants Malades, INEM, Paris, France.
Abstract:
Premature termination codons (PTCs) are generally associated with severe forms of genetic diseases. Readthrough of in-frame PTCs using small molecules is a promising therapeutic approach. Nonetheless, the outcome of preclinical studies has been low and variable. Treatment efficacy depends on: 1) the level of drug-induced readthrough, 2) the amount of target transcripts, and 3) the activity of the recoded protein. The aim of the present study was to identify, in the cystic fibrosis transmembrane conductance regulator (CFTR) model, recoded channels from readthrough therapy that may be enhanced using CFTR modulators. First, drug-induced readthrough of 15 PTCs was measured using a dual reporter system under basal conditions and in response to gentamicin and negamycin. Secondly, exon skipping associated with these PTCs was evaluated with a minigene system. Finally, incorporated amino acids were identified by mass spectrometry and the function of the predicted recoded CFTR channels corresponding to these 15 PTCs was measured. Nonfunctional channels were subjected to CFTR-directed ivacaftor-lumacaftor treatments. The results demonstrated that CFTR modulators increased activity of recoded channels, which could also be confirmed in cells derived from a patient. In conclusion, this work will provide a framework to adapt treatments to the patient's genotype by identifying the most efficient molecule for each PTC and the recoded channels needing co-therapies to rescue channel function.
Insights
Small molecules can help read through premature termination codons (PTCs) in genetic diseases. This study enhanced PTC readthrough therapy for cystic fibrosis transmembrane conductance regulator (CFTR) by using CFTR modulators to boost recoded channel activity.
Area of Science:
- Genetics
- Pharmacology
- Molecular Biology
Background:
- Premature termination codons (PTCs) often cause severe genetic disorders.
- Readthrough therapy using small molecules offers a potential treatment strategy.
- Current readthrough therapy outcomes are variable due to factors like drug-induced readthrough levels, target transcript amounts, and recoded protein activity.
Purpose of the Study:
- To identify recoded cystic fibrosis transmembrane conductance regulator (CFTR) channels resulting from readthrough therapy.
- To investigate enhancing these recoded channels using CFTR modulators.
- To establish a framework for genotype-specific treatment adaptation.
Main Methods:
- Measured drug-induced readthrough of 15 PTCs using a dual reporter system with gentamicin and negamycin.
- Evaluated PTC-associated exon skipping with a minigene system.
- Identified incorporated amino acids via mass spectrometry and measured recoded CFTR channel function.
- Assessed nonfunctional channels with CFTR modulators (ivacaftor-lumacaftor).
Main Results:
- Demonstrated that CFTR modulators significantly increased the activity of recoded CFTR channels.
- Confirmed enhanced channel function in patient-derived cells.
- Provided data on the efficacy of different molecules for specific PTCs.
Conclusions:
- CFTR modulators can enhance the function of recoded channels produced by readthrough therapy.
- This approach offers a personalized treatment strategy for cystic fibrosis based on individual genotypes.
- Identifying optimal drug combinations is key to rescuing CFTR channel function.
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