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Updated: Feb 13, 2026

Quantification of Immunostained Caspase-9 in Retinal Tissue
Published on: July 25, 2022
Caspase-9 CARD : core domain interactions require a properly formed active site
Kristen L Huber, Banyuhay P Serrano, Jeanne A Hardy1
1Department of Chemistry, 104 LGRT, 710 N. Pleasant St, University of Massachusetts, Amherst, MA 01003, U.S.A. hardy@chem.umass.edu.
Insights
The caspase-9 CARD domain interacts with its catalytic core, revealing a new regulatory mechanism. This interaction depends on an ordered active site, suggesting novel roles beyond apoptosome recruitment.
Area of Science:
- Biochemistry
- Molecular Biology
- Cellular Biology
Background:
- Caspase-9 is a key regulator of apoptosis, essential for programmed cell death.
- Its Caspase Activation and Recruitment Domain (CARD) facilitates interaction with the apoptosome.
- The precise function of the caspase-9 CARD outside of apoptosome interaction remains largely unexplored.
Purpose of the Study:
- To investigate the role of the caspase-9 CARD domain in regulating caspase-9 activity.
- To explore potential interactions of the CARD domain independent of the apoptosome.
- To elucidate the structural requirements for CARD-core domain interaction.
Main Methods:
- Biochemical assays to study protein-protein interactions.
- Analysis of caspase-9 structure and active site dynamics.
- Investigating the impact of active site conformation on CARD-core interaction.
Main Results:
- The caspase-9 CARD domain physically interacts with the catalytic core of caspase-9.
- This interaction is dependent on a properly formed and ordered active site.
- Disordered active site loops prevent CARD-core interaction, leading to independent domain behavior.
Conclusions:
- The caspase-9 CARD domain plays a regulatory role through intramolecular interaction with the catalytic core.
- Active site conformation is critical for this novel regulatory mechanism.
- The CARD domain may be involved in substrate recruitment or recognition in addition to apoptosome binding.
Abstract:
Caspase-9 is a critical factor in the initiation of apoptosis and as a result is tightly regulated by many mechanisms. Caspase-9 contains a Caspase Activation and Recruitment Domain (CARD), which enables caspase-9 to form a tight interaction with the apoptosome, a heptameric activating platform. The caspase-9 CARD has been thought to be principally involved in recruitment to the apoptosome, but its roles outside this interaction have yet to be uncovered. In this work, we show that the CARD is involved in physical interactions with the catalytic core of caspase-9 in the absence of the apoptosome; this interaction requires a properly formed caspase-9 active site. The active sites of caspases are composed of four extremely mobile loops. When the active-site loops are not properly ordered, the CARD and core domains of caspase-9 do not interact and behave independently, like loosely tethered beads. When the active-site loop bundle is properly ordered, the CARD domain interacts with the catalytic core, forming a single folding unit. Taken together, these findings provide mechanistic insights into a new level of caspase-9 regulation, prompting speculation that the CARD may also play a role in the recruitment or recognition of substrate.
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