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Functional TRIM24 degrader via conjugation of ineffectual bromodomain and VHL ligands
Lara N Gechijian1, Dennis L Buckley1, Matthew A Lawlor1
1Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Abstract:
The addressable pocket of a protein is often not functionally relevant in disease. This is true for the multidomain, bromodomain-containing transcriptional regulator TRIM24. TRIM24 has been posited as a dependency in numerous cancers, yet potent and selective ligands for the TRIM24 bromodomain do not exert effective anti-proliferative responses. We therefore repositioned these probes as targeting features for heterobifunctional protein degraders. Recruitment of the VHL E3 ubiquitin ligase by dTRIM24 elicits potent and selective degradation of TRIM24. Using dTRIM24 to probe TRIM24 function, we characterize the dynamic genome-wide consequences of TRIM24 loss on chromatin localization and gene control. Further, we identify TRIM24 as a novel dependency in acute leukemia. Pairwise study of TRIM24 degradation versus bromodomain inhibition reveals enhanced anti-proliferative response from degradation. We offer dTRIM24 as a chemical probe of an emerging cancer dependency, and establish a path forward for numerous selective yet ineffectual ligands for proteins of therapeutic interest.
Insights
Targeting the TRIM24 protein with degraders, not just inhibitors, effectively reduces cancer cell proliferation. This approach reveals TRIM24
Area of Science:
- Molecular Biology
- Cancer Research
- Chemical Biology
Background:
- The TRIM24 protein, a transcriptional regulator, is implicated in various cancers.
- Selective inhibitors targeting TRIM24's bromodomain show limited anti-cancer effects.
- The functional relevance of protein pockets in disease often differs from their druggability.
Purpose of the Study:
- To investigate TRIM24 as a cancer dependency.
- To develop novel therapeutic strategies beyond direct bromodomain inhibition.
- To explore TRIM24 degradation as a means to control cancer cell proliferation.
Main Methods:
- Development of heterobifunctional degraders targeting TRIM24 (dTRIM24).
- Utilizing the VHL E3 ubiquitin ligase for TRIM24 degradation.
- Genome-wide analysis of TRIM24 loss effects on chromatin and gene expression.
- Comparative studies of TRIM24 degradation versus bromodomain inhibition.
Main Results:
- dTRIM24 induces potent and selective degradation of TRIM24.
- TRIM24 loss significantly impacts genome-wide chromatin localization and gene control.
- TRIM24 is identified as a critical dependency in acute leukemia.
- TRIM24 degradation demonstrates superior anti-proliferative activity compared to bromodomain inhibition.
Conclusions:
- TRIM24 degradation is a promising therapeutic strategy for cancers, including acute leukemia.
- Heterobifunctional degraders can overcome limitations of traditional inhibitors for certain protein targets.
- dTRIM24 serves as a valuable chemical probe for studying TRIM24 function and its role in cancer.
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