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Oropharyngeal Microbiota in Frail Older Patients Unaffected by Time in Hospital
Victoria C Ewan1,2, William D K Reid3, Mark Shirley4
1South Tees Hospital, NHS Foundation Trust, Middlesbrough, United Kingdom.
Abstract:
Respiratory tract infections are the commonest nosocomial infections, and occur predominantly in frailer, older patients with multiple comorbidities. The oropharyngeal microbiota is the major reservoir of infection. This study explored the relative contributions of time in hospital and patient demographics to the community structure of the oropharyngeal microbiota in older patients with lower limb fracture. We collected 167 throat swabs from 53 patients (mean age 83) over 14 days after hospitalization, and analyzed these using 16S rRNA gene sequencing. We calculated frailty/comorbidity indices, undertook dental examinations and collected data on respiratory tract infections. We analyzed microbial community composition using correspondence (CA) and canonical correspondence analysis. Ten patients were treated for respiratory tract infection. Microbial community structure was related to frailty, number of teeth and comorbidity on admission, with comorbidity exerting the largest effect. Time in hospital neither significantly changed alpha (t = -0.910, p = 0.365) nor beta diversity (CA1 t = 0.022, p = 0.982; CA2 t = -0.513, p = 0.609) of microbial communities in patient samples. Incidence of respiratory pathogens were not associated with time in hospital (t = -0.207, p = 0.837), nor with alpha diversity of the oral microbiota (t = -1.599, p = 0.113). Patient characteristics at admission, rather than time in hospital, influenced the community structure of the oral microbiota.
Insights
Patient frailty and comorbidities, not hospital stay duration, shape the oropharyngeal microbiota in older adults with fractures. This impacts understanding infection reservoirs in vulnerable populations.
Area of Science:
- Microbiology
- Geriatrics
- Infectious Diseases
Background:
- Nosocomial infections, particularly respiratory tract infections (RTIs), are common in elderly patients with comorbidities.
- The oropharyngeal microbiota serves as a primary reservoir for these infections.
- Understanding factors influencing oropharyngeal microbial community structure is crucial for infection prevention in vulnerable patient groups.
Purpose of the Study:
- To investigate the influence of hospitalization duration and patient demographics on the oropharyngeal microbiota community structure in older adults with lower limb fractures.
- To determine whether patient characteristics at admission or time in hospital are more significant drivers of microbial community composition.
Main Methods:
- 16S rRNA gene sequencing of 167 throat swabs from 53 patients (mean age 83) over 14 days post-hospitalization.
- Assessment of frailty/comorbidity indices, dental status, and RTI incidence.
- Analysis of microbial community structure using correspondence analysis (CA) and canonical correspondence analysis.
Main Results:
- Microbial community structure was significantly associated with frailty, number of teeth, and comorbidity at admission, with comorbidity having the most substantial impact.
- Hospitalization duration did not significantly alter alpha or beta diversity of the oropharyngeal microbiota.
- The incidence of respiratory pathogens was not linked to time in hospital or oral microbiota alpha diversity.
Conclusions:
- Patient characteristics present at admission, particularly comorbidities, are the primary determinants of oropharyngeal microbiota structure in older adults with fractures.
- Hospitalization duration is not a significant factor in shaping the oropharyngeal microbial landscape in this population.
- These findings highlight the importance of baseline patient factors in understanding infection risk and oropharyngeal microbiota dynamics.
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